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Integrative Orthology Viewer:
BR07G04960
(Brassica rapa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Brassica rapa | Orthologous gene family | BR01G27070 BR02G27630 BR07G04960 | 3 |  |
| Tree-based ortholog | BR07G04960 | 1 | ||
| Anchor point | BR01G27070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | BR07G04960 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00067G01320 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00067G01320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00067G01320 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL3G27030 AL6G32320 | 2 | |
| Tree-based ortholog | 1-to-1 | AL3G27030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G27030 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT3G24180 AT4G10060 | 2 | |
| Tree-based ortholog | 1-to-1 | AT3G24180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G24180 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV2G13310 | 1 | |
| Tree-based ortholog | 1-to-1 | BV2G13310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G13310 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_003G23310 CRU_006G27580 | 2 | |
| Tree-based ortholog | 1-to-1 | CRU_003G23310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G23310 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00021G00790 CP00113G00120 | 2 | |
| Tree-based ortholog | 1-to-1 | CP00059G01220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00059G01220 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL06G07560 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G07560 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00055G00020 CS00176G00230 | 2 | |
| Tree-based ortholog | 1-to-1 | CS00055G00020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00055G00020 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00043G01270 CM00094G00350 | 2 | |
| Tree-based ortholog | 1-to-1 | CM00043G01270 | 1 | ||
| Anchor point | 1-to-1 | CM00043G01270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00043G01270 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0008G23090 | 1 | |
| Tree-based ortholog | 1-to-many | EG0008G00700 EG0008G23090 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G23090 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV4G07670 | 1 | |
| Tree-based ortholog | 1-to-1 | FV4G07670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G07670 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM07G40310 GM10G33610 GM20G33990 | 3 | |
| Tree-based ortholog | 1-to-many | GM20G33990 GM10G33610 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM20G33990 GM10G33610 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR06G22120 GR11G16030 | 2 | |
| Tree-based ortholog | 1-to-many | GR11G16030 GR06G22120 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G22120 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ4G000300 LJ5G017180 | 2 | |
| Tree-based ortholog | 1-to-1 | LJ5G017180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G017180 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD08G022680 MD09G015230 | 2 | |
| Tree-based ortholog | 1-to-1 | MD09G015230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD09G015230 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME03332G01490 | 1 | |
| Tree-based ortholog | 1-to-1 | ME03332G01490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03332G01490 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT1G072720 | 1 | |
| Tree-based ortholog | 1-to-1 | MT1G072720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G072720 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS08G01940 OS10G33420 | 2 | |
| Tree-based ortholog | 1-to-1 | OS10G33420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS10G33420 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00134G00180 PP00040G00960 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00134G00180 PP00040G00960 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT00G00580 PT03G17800 | 2 | |
| Tree-based ortholog | 1-to-1 | PT03G17800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT03G17800 | 1 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_001G00450 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G00450 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29904G00810 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29904G00810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29904G00810 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL09G091850 | 1 | |
| Tree-based ortholog | 1-to-1 | SL09G091850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G091850 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST09G028350 | 1 | |
| Tree-based ortholog | 1-to-1 | ST09G028350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G028350 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP3G21260 | 1 | |
| Tree-based ortholog | 1-to-1 | TP3G21260 | 1 | ||
| Anchor point | 1-to-1 | TP3G21260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G21260 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0004G21100 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0004G21100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G21100 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-many | VV12G06870 VV00G23240 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV12G06870 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM02G28180 ZM06G00630 | 2 | |
| Tree-based ortholog | 1-to-many | ZM01G42310 ZM02G28180 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM04G03390 | 1 |