Integrative Orthology Viewer: BR06G38550 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR00G06900 BR06G38550 | 2 | |
Tree-based ortholog | BR06G38550 BR00G06900 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | BR06G38550 BR00G06900 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00002G05150 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00002G05150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00002G05150 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL0G06140 AL1G03560 | 2 | |
Tree-based ortholog | many-to-1 | AL0G06140 | 1 | ||
Anchor point | N/A | AL8G06350 AL1G03560 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL0G06140 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G04230 AT5G43720 | 2 | |
Tree-based ortholog | many-to-1 | AT5G43720 | 1 | ||
Anchor point | N/A | AT1G04230 AT5G43720 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G43720 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV4G04800 | 1 | |
Tree-based ortholog | many-to-1 | BV4G04790 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV4G04800 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G03140 CRU_008G04810 | 2 | |
Tree-based ortholog | many-to-1 | CRU_008G04810 | 1 | ||
Anchor point | N/A | CRU_008G04810 CRU_001G03140 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_008G04810 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00058G00190 | 1 | |
Tree-based ortholog | many-to-many | CP45152G00010 CP00058G00190 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00058G00190 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | many-to-1 | CR10G07570 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR10G07570 | 1 | ||
Citrullus lanatus | Tree-based ortholog | many-to-1 | CL05G05160 | 1 | |
Anchor point | N/A | CL05G05160 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL05G05160 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00132G00150 | 1 | |
Tree-based ortholog | many-to-1 | CS00132G00150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00132G00150 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00006G05820 | 1 | |
Tree-based ortholog | many-to-1 | CM00006G05820 | 1 | ||
Anchor point | N/A | CM00006G05820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00006G05820 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0008G25710 | 1 | |
Tree-based ortholog | many-to-1 | EG0008G25710 | 1 | ||
Anchor point | N/A | EG0008G25710 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0008G25710 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV2G44470 | 1 | |
Tree-based ortholog | many-to-1 | FV2G44470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV2G44470 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM10G32310 GM20G35300 | 2 | |
Tree-based ortholog | many-to-many | GM10G32310 GM20G35300 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM10G32310 GM20G35300 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR06G07010 GR11G17050 | 2 | |
Tree-based ortholog | many-to-many | GR03G09190 GR07G21200 GR06G07010 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR06G07010 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ5G022660 | 1 | |
Tree-based ortholog | many-to-1 | LJ5G022660 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ5G022660 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD16G015160 | 1 | |
Tree-based ortholog | many-to-many | MD00G204480 MD00G140380 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD16G015160 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME01551G01460 ME10563G00630 | 2 | |
Tree-based ortholog | many-to-1 | ME10563G00630 | 1 | ||
Anchor point | N/A | ME01551G01460 ME10563G00630 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME01551G01460 ME10563G00630 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT1G076290 | 1 | |
Tree-based ortholog | many-to-1 | MT1G076290 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT1G076290 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS03G58340 | 1 | |
Tree-based ortholog | many-to-1 | OS03G58340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G58340 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL07G02090 | 1 | |
Tree-based ortholog | many-to-1 | OL07G02090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL07G02090 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00001G00480 | 1 | |
Tree-based ortholog | many-to-1 | PP00001G00480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00001G00480 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT08G16080 PT10G07850 | 2 | |
Tree-based ortholog | many-to-1 | PT10G07850 | 1 | ||
Anchor point | N/A | PT10G07850 PT08G16080 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT08G16080 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_001G02650 | 1 | |
Tree-based ortholog | many-to-1 | PPE_001G02650 | 1 | ||
Anchor point | N/A | PPE_001G02650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_001G02650 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29844G00240 | 1 | |
Tree-based ortholog | many-to-1 | RC29844G00240 | 1 | ||
Anchor point | N/A | RC29844G00240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29844G00240 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL09G083270 | 1 | |
Tree-based ortholog | many-to-1 | SL09G083270 | 1 | ||
Anchor point | N/A | SL09G083270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL09G083270 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST09G025150 | 1 | |
Tree-based ortholog | many-to-1 | ST09G025150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST09G025150 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP2G08510 | 1 | |
Tree-based ortholog | many-to-1 | TP2G08510 | 1 | ||
Anchor point | N/A | TP2G08510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP2G08510 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0004G24690 | 1 | |
Tree-based ortholog | many-to-1 | TC0004G24690 | 1 | ||
Anchor point | N/A | TC0004G24690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0004G24690 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV05G05880 | 1 | |
Tree-based ortholog | many-to-1 | VV05G05880 | 1 | ||
Anchor point | N/A | VV05G05880 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV05G05880 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM01G32500 | 1 | |
Tree-based ortholog | many-to-1 | ZM01G32500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G32500 | 1 |