Integrative Orthology Viewer: BR06G37620 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR01G10430 BR02G27860 BR03G45100 ... | 7 | |
Anchor point | BR01G10430 BR02G27860 BR09G27300 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | BR02G27860 BR06G37620 | 2 | ||
Tree-based ortholog | BR06G37620 BR02G27860 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00048G02290 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00048G02290 | 1 | ||
Tree-based ortholog | many-to-1 | ATR_00048G02290 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G36490 AL3G00480 AL7G23120 ... | 5 | |
Anchor point | many-to-many | AL7G23120 AL8G03370 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL8G03370 | 1 | ||
Tree-based ortholog | many-to-many | AL8G03430 AL8G03370 | 2 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G31470 AT3G01630 AT4G19450 ... | 4 | |
Anchor point | many-to-many | AT4G19450 AT5G45275 AT1G31470 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G45275 | 1 | ||
Tree-based ortholog | many-to-1 | AT5G45275 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV5G19480 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV5G19480 | 1 | ||
Tree-based ortholog | many-to-1 | BV5G19480 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G28520 CRU_003G00410 CRU_007G20790 ... | 4 | |
Anchor point | many-to-many | CRU_001G28520 CRU_007G20790 CRU_008G02780 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_008G02780 | 1 | ||
Tree-based ortholog | many-to-1 | CRU_008G02780 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00073G00580 CP03403G00010 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00073G00580 | 1 | ||
Tree-based ortholog | many-to-1 | CP03403G00010 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR01G08650 | 1 | |
Tree-based ortholog | many-to-1 | CR01G08650 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL06G00640 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL07G15800 | 1 | ||
Tree-based ortholog | many-to-1 | CL07G15800 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00341G00080 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00341G00080 | 1 | ||
Tree-based ortholog | many-to-1 | CS00341G00080 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00027G01880 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00027G01880 | 1 | ||
Tree-based ortholog | many-to-1 | CM00027G01880 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0004G21480 EG0005G14300 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0004G21480 | 1 | ||
Tree-based ortholog | many-to-1 | EG0004G21480 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV7G18830 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV5G33470 | 1 | ||
Tree-based ortholog | many-to-1 | FV5G33470 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G35450 GM03G24141 GM07G12450 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GM16G17240 | 1 | ||
Tree-based ortholog | many-to-many | GM16G08216 GM16G17240 GM09G35000 ... | 4 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR04G17580 GR04G25400 GR07G24960 | 3 | |
Anchor point | many-to-1 | GR04G17580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR04G17580 | 1 | ||
Tree-based ortholog | many-to-1 | GR04G17580 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ2G027420 LJ3G008140 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ2G027420 | 1 | ||
Tree-based ortholog | many-to-1 | LJ2G027420 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G387100 MD02G022650 MD06G002220 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD06G002220 | 1 | ||
Tree-based ortholog | many-to-many | MD00G387100 MD06G002220 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME07810G00040 ME10719G00030 ME11297G00950 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME07810G00040 | 1 | ||
Tree-based ortholog | many-to-many | ME10719G00030 ME07810G00040 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT5G026350 MT7G083660 MT8G071920 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT5G026350 | 1 | ||
Tree-based ortholog | many-to-many | MT8G071920 MT5G026350 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS11G01590 OS12G01570 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | OS11G01590 OS12G01570 | 2 | ||
Tree-based ortholog | many-to-many | OS11G01590 OS12G01570 | 2 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00056G01100 PP00025G01880 | 2 | |
Tree-based ortholog | many-to-many | PP00032G01490 PP00040G00370 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G12820 PT03G10560 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT03G10560 PT01G12820 | 2 | ||
Tree-based ortholog | many-to-many | PT01G12820 PT03G10560 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_002G10690 PPE_005G01740 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_005G01740 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_005G01740 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30148G00200 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30148G00200 | 1 | ||
Tree-based ortholog | many-to-1 | RC30148G00200 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G081410 SL08G074960 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL08G074960 | 1 | ||
Tree-based ortholog | many-to-1 | SL08G074960 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G027700 ST01G027760 ST08G020000 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST08G020040 | 1 | ||
Tree-based ortholog | many-to-many | ST08G020040 ST08G020000 | 2 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP2G10180 TP3G00420 TP7G18070 | 3 | |
Anchor point | many-to-many | TP2G10180 TP7G18070 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP2G10180 | 1 | ||
Tree-based ortholog | many-to-1 | TP2G10180 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0003G31710 TC0005G23430 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0003G31710 | 1 | ||
Tree-based ortholog | many-to-1 | TC0003G31710 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV02G09500 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV02G09500 | 1 | ||
Tree-based ortholog | many-to-1 | VV02G09500 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM02G25790 ZM03G41030 ZM06G02230 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM03G41030 ZM06G13950 | 2 | ||
Tree-based ortholog | many-to-many | ZM02G25790 ZM06G02230 ZM03G41030 ... | 4 |