Integrative Orthology Viewer: BR06G36400 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR00G02260 BR06G36400 BR09G22430 | 3 | |
Tree-based ortholog | BR06G36400 BR00G02260 | 2 | ||
Anchor point | BR09G22430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | BR06G36400 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00002G01590 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00002G01590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00002G01590 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL7G25350 AL8G00870 | 2 | |
Tree-based ortholog | many-to-1 | AL8G00870 | 1 | ||
Anchor point | 1-to-many | AL7G25350 AL8G00870 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G00870 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT4G17600 AT5G47110 | 2 | |
Tree-based ortholog | many-to-1 | AT5G47110 | 1 | ||
Anchor point | 1-to-many | AT4G17600 AT5G47110 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G47110 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV5G22580 | 1 | |
Tree-based ortholog | many-to-1 | BV5G22580 | 1 | ||
Anchor point | 1-to-1 | BV5G22580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G22580 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_007G22740 CRU_008G00670 | 2 | |
Tree-based ortholog | many-to-1 | CRU_008G00670 | 1 | ||
Anchor point | 1-to-many | CRU_007G22740 CRU_008G00670 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G00670 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00098G00210 | 1 | |
Tree-based ortholog | many-to-1 | CP00098G00210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00098G00210 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR03G14740 | 1 | |
Tree-based ortholog | many-to-1 | CR03G14740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G14740 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL10G02190 | 1 | |
Tree-based ortholog | many-to-1 | CL10G02190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G02190 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00095G00270 | 1 | |
Tree-based ortholog | many-to-1 | CS00095G00270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00095G00270 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00021G02140 | 1 | |
Tree-based ortholog | many-to-1 | CM00021G02140 | 1 | ||
Anchor point | 1-to-1 | CM00021G02140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00021G02140 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0005G03220 | 1 | |
Tree-based ortholog | many-to-1 | EG0005G03220 | 1 | ||
Anchor point | 1-to-1 | EG0005G03220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0005G03220 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV5G31680 | 1 | |
Tree-based ortholog | many-to-1 | FV5G31680 | 1 | ||
Anchor point | 1-to-1 | FV7G31840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G31680 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM05G05450 GM17G15730 | 2 | |
Tree-based ortholog | many-to-many | GM17G15730 GM05G05450 GM01G41320 | 3 | ||
Anchor point | 1-to-many | GM01G41320 GM05G05450 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM05G05450 GM17G15730 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR04G19220 GR08G23110 | 2 | |
Tree-based ortholog | many-to-many | GR08G23110 GR04G19220 | 2 | ||
Anchor point | 1-to-many | GR04G19220 GR08G23110 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G19220 | 1 | ||
Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G033830 | 1 | |
Malus domestica | Orthologous gene family | many-to-many | MD00G132480 MD06G004850 | 2 | |
Tree-based ortholog | many-to-many | MD06G004850 MD00G232960 MD00G132480 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G132480 MD06G004850 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME11341G00610 ME11581G01230 | 2 | |
Tree-based ortholog | many-to-many | ME11341G00610 ME11581G01230 | 2 | ||
Anchor point | 1-to-many | ME11581G01230 ME11341G00610 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME11341G00610 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT4G099340 | 1 | |
Tree-based ortholog | many-to-1 | MT4G099340 | 1 | ||
Anchor point | 1-to-1 | MT4G099330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G099340 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS02G03330 | 1 | |
Tree-based ortholog | many-to-1 | OS02G03330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G03330 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL03G01980 | 1 | |
Tree-based ortholog | many-to-1 | OL03G01980 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL03G01980 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00021G00550 PP00079G00510 PP00336G00150 | 3 | |
Tree-based ortholog | many-to-many | PP00021G00550 PP00336G00150 PP00079G00510 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00079G00510 PP00021G00550 PP00336G00150 | 3 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G15130 PT03G08350 | 2 | |
Tree-based ortholog | many-to-many | PT03G08350 PT01G15130 | 2 | ||
Anchor point | 1-to-many | PT03G08350 PT01G15130 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT03G08350 PT01G15130 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_005G06150 | 1 | |
Tree-based ortholog | many-to-1 | PPE_005G06150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G06150 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29738G00050 | 1 | |
Tree-based ortholog | many-to-1 | RC29738G00050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29738G00050 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL08G007180 SL08G077880 | 2 | |
Tree-based ortholog | many-to-many | SL08G007180 SL08G077880 | 2 | ||
Anchor point | 1-to-many | SL08G007180 SL08G077880 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL08G007180 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST08G006020 ST08G023430 | 2 | |
Tree-based ortholog | many-to-many | ST08G006020 ST08G023430 | 2 | ||
Anchor point | 1-to-1 | ST08G023430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST08G023430 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP2G11920 | 1 | |
Tree-based ortholog | many-to-1 | TP2G11920 | 1 | ||
Anchor point | 1-to-many | TP2G11920 TP7G16560 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G11920 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0003G23830 | 1 | |
Tree-based ortholog | many-to-1 | TC0003G23830 | 1 | ||
Anchor point | 1-to-1 | TC0003G23830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G23830 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV00G07340 | 1 | |
Tree-based ortholog | many-to-1 | VV00G07340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV00G07340 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM04G40610 | 1 | |
Tree-based ortholog | many-to-1 | ZM04G40610 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM04G40610 | 1 |