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Integrative Orthology Viewer:
BR06G34400
(Brassica rapa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Brassica rapa | Orthologous gene family | BR06G34400 | 1 |  |
| Anchor point | BR02G30180 BR10G19510 BR09G21170 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | BR06G34400 | 1 | ||
| Tree-based ortholog | BR06G34400 BR09G21170 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00047G01910 | 1 | |
| Tree-based ortholog | many-to-1 | ATR_00001G02190 | 1 | ||
| Arabidopsis lyrata | Anchor point | many-to-many | AL2G17480 AL5G03320 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G03320 | 1 | ||
| Tree-based ortholog | many-to-1 | AL5G03320 | 1 | ||
| Arabidopsis thaliana | Anchor point | many-to-many | AT1G26355 AT1G69230 AT2G03680 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G03680 | 1 | ||
| Tree-based ortholog | many-to-1 | AT2G03680 | 1 | ||
| Beta vulgaris | Anchor point | many-to-1 | BV6G14150 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G14150 | 1 | ||
| Tree-based ortholog | many-to-1 | BV6G14150 | 1 | ||
| Capsella rubella | Anchor point | many-to-many | CRU_005G02610 CRU_002G14860 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G02610 | 1 | ||
| Tree-based ortholog | many-to-1 | CRU_005G02610 | 1 | ||
| Carica papaya | Anchor point | many-to-1 | CP00001G01370 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00094G00690 | 1 | ||
| Tree-based ortholog | many-to-many | CP00001G01370 CP00285G00040 CP00014G01970 ... | 4 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR09G06660 CR11G00540 | 2 | |
| Tree-based ortholog | many-to-1 | CR09G06660 | 1 | ||
| Citrullus lanatus | Anchor point | many-to-1 | CL08G10170 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G10170 | 1 | ||
| Tree-based ortholog | many-to-many | CL08G10170 CL11G14060 | 2 | ||
| Citrus sinensis | Anchor point | many-to-1 | CS00019G01950 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00019G01950 | 1 | ||
| Tree-based ortholog | many-to-many | CS00019G01950 CS11621G00010 CS00030G00920 | 3 | ||
| Cucumis melo | Anchor point | many-to-1 | CM00014G07900 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00014G07900 | 1 | ||
| Tree-based ortholog | many-to-1 | CM00014G07900 | 1 | ||
| Eucalyptus grandis | Anchor point | many-to-many | EG0002G25790 EG0002G05310 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G05310 | 1 | ||
| Tree-based ortholog | many-to-many | EG0002G25790 EG0002G05310 EG0010G12180 | 3 | ||
| Fragaria vesca | Anchor point | many-to-many | FV0G03930 FV5G11890 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G42290 | 1 | ||
| Tree-based ortholog | many-to-many | FV0G03930 FV5G11890 | 2 | ||
| Glycine max | Anchor point | many-to-1 | GM02G13180 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM13G06390 GM19G03961 | 2 | ||
| Tree-based ortholog | many-to-many | GM13G06390 GM19G03961 | 2 | ||
| Gossypium raimondii | Anchor point | many-to-many | GR05G14580 GR13G09490 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR13G09490 | 1 | ||
| Tree-based ortholog | many-to-many | GR13G09490 GR05G14580 GR01G07640 ... | 4 | ||
| Malus domestica | Anchor point | many-to-many | MD06G016780 MD14G020230 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD09G004940 | 1 | ||
| Tree-based ortholog | many-to-many | MD00G040240 MD00G470460 MD00G210940 ... | 6 | ||
| Manihot esculenta | Anchor point | many-to-many | ME06656G00990 ME08359G01530 ME04489G00130 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06609G00060 | 1 | ||
| Tree-based ortholog | many-to-many | ME00109G00330 ME04489G00130 ME04043G01980 ... | 6 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT7G024310 MT6G015390 | 2 | |
| Tree-based ortholog | many-to-1 | MT6G015390 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS12G31780 | 1 | |
| Tree-based ortholog | many-to-1 | OS12G31780 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00124G00080 | 1 | |
| Tree-based ortholog | many-to-1 | PP00124G00080 | 1 | ||
| Populus trichocarpa | Anchor point | many-to-many | PT10G15760 PT08G09700 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G15760 PT08G09700 | 2 | ||
| Tree-based ortholog | many-to-many | PT10G15760 PT08G09700 PT17G09520 ... | 5 | ||
| Prunus persica | Anchor point | many-to-many | PPE_005G21020 PPE_001G30030 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G23140 | 1 | ||
| Tree-based ortholog | many-to-many | PPE_001G30030 PPE_003G23140 PPE_005G21020 | 3 | ||
| Ricinus communis | Anchor point | many-to-1 | RC30174G04880 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC27623G00040 | 1 | ||
| Tree-based ortholog | many-to-many | RC30174G04880 RC27623G00040 RC30138G01240 | 3 | ||
| Solanum lycopersicum | Anchor point | many-to-1 | SL05G012160 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G012160 | 1 | ||
| Tree-based ortholog | many-to-many | SL05G012160 SL01G010270 SL03G114970 | 3 | ||
| Solanum tuberosum | Anchor point | many-to-1 | ST05G005860 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G005860 | 1 | ||
| Tree-based ortholog | many-to-many | ST05G005860 ST03G028500 | 2 | ||
| Thellungiella parvula | Anchor point | many-to-many | TP1G22340 TP2G14500 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G14500 | 1 | ||
| Tree-based ortholog | many-to-1 | TP2G14500 | 1 | ||
| Theobroma cacao | Anchor point | many-to-1 | TC0002G32830 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G10230 | 1 | ||
| Tree-based ortholog | many-to-many | TC0002G32830 TC0003G10760 | 2 | ||
| Vitis vinifera | Anchor point | many-to-1 | VV01G10560 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G00170 | 1 | ||
| Tree-based ortholog | many-to-many | VV14G12980 VV01G10560 VV17G04670 ... | 5 | ||
| Zea mays | Anchor point | many-to-1 | ZM09G19590 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM04G01810 | 1 | ||
| Tree-based ortholog | many-to-1 | ZM10G04140 | 1 |