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Integrative Orthology Viewer:
BR06G34020
(Brassica rapa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Brassica rapa | Orthologous gene family | BR06G34020 | 1 |  |
| Tree-based ortholog | BR09G20880 BR06G34020 | 2 | ||
| Anchor point | BR09G29560 BR09G20880 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | BR06G34020 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | many-to-many | ATR_00019G03240 ATR_00048G00400 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00048G00400 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | many-to-1 | AL5G04260 | 1 | |
| Anchor point | many-to-many | AL5G04260 AL1G14000 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G04260 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | many-to-1 | AT3G25800 | 1 | |
| Anchor point | many-to-many | AT1G13320 AT3G25800 AT1G25490 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G25800 | 1 | ||
| Beta vulgaris | Tree-based ortholog | many-to-1 | BV6G00540 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G00540 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_135G00030 | 1 | |
| Tree-based ortholog | many-to-many | CRU_003G29780 CRU_135G00030 CRU_001G12440 | 3 | ||
| Anchor point | many-to-1 | CRU_001G12440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CRU_001G12440 CRU_003G29780 | 2 | ||
| Carica papaya | Tree-based ortholog | many-to-1 | CP00001G01920 | 1 | |
| Anchor point | many-to-1 | CP00001G01920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00001G01920 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | many-to-1 | CR11G03920 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR11G03920 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | many-to-1 | CL05G23960 | 1 | |
| Anchor point | many-to-1 | CL05G23960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G23960 | 1 | ||
| Citrus sinensis | Tree-based ortholog | many-to-1 | CS00019G00530 | 1 | |
| Anchor point | many-to-1 | CS00019G00530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00019G00530 | 1 | ||
| Cucumis melo | Tree-based ortholog | many-to-1 | CM00016G05640 | 1 | |
| Anchor point | many-to-1 | CM00016G05640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00016G05640 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | many-to-1 | EG0002G24800 | 1 | |
| Anchor point | many-to-many | EG0002G24800 EG0002G05910 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G24800 | 1 | ||
| Fragaria vesca | Tree-based ortholog | many-to-many | FV5G36360 FV0G01970 | 2 | |
| Anchor point | many-to-1 | FV0G01970 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G01970 | 1 | ||
| Glycine max | Tree-based ortholog | many-to-many | GM20G24790 GM10G42250 GM02G10790 | 3 | |
| Anchor point | many-to-many | GM20G24790 GM10G42250 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM20G24790 GM10G42250 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | many-to-many | GR13G08130 GR08G18450 | 2 | |
| Anchor point | many-to-1 | GR08G18450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR08G28610 GR07G00610 | 2 | ||
| Lotus japonicus | Tree-based ortholog | many-to-many | LJ2G011230 LJ5G026010 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G011230 | 1 | ||
| Malus domestica | Tree-based ortholog | many-to-many | MD00G422000 MD00G306290 MD00G433430 ... | 4 | |
| Anchor point | many-to-1 | MD16G001880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G422000 MD00G433430 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME06005G00240 | 1 | |
| Tree-based ortholog | many-to-1 | ME08359G00320 | 1 | ||
| Anchor point | many-to-many | ME05898G00020 ME06005G00240 ME08359G00320 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08359G00320 | 1 | ||
| Medicago truncatula | Tree-based ortholog | many-to-1 | MT1G111270 | 1 | |
| Anchor point | many-to-many | MT6G084690 MT1G111270 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G111270 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | many-to-1 | OS09G07510 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS09G07510 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | many-to-1 | OL07G02200 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL07G02200 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | many-to-many | PP00117G00540 PP00214G00150 PP00197G00680 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00117G00540 PP00214G00150 PP00197G00680 | 3 | ||
| Populus trichocarpa | Tree-based ortholog | many-to-1 | PT08G11850 | 1 | |
| Anchor point | many-to-many | PT10G12750 PT08G11850 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT08G11850 | 1 | ||
| Prunus persica | Tree-based ortholog | many-to-many | PPE_005G22240 PPE_001G31760 | 2 | |
| Anchor point | many-to-1 | PPE_001G31760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G31760 | 1 | ||
| Ricinus communis | Tree-based ortholog | many-to-1 | RC28883G00240 | 1 | |
| Anchor point | many-to-1 | RC28883G00240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28883G00240 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | many-to-1 | SL06G069180 | 1 | |
| Anchor point | many-to-many | SL06G069180 SL04G007100 SL05G009600 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G009600 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | many-to-1 | ST06G026100 | 1 | |
| Anchor point | many-to-many | ST06G026100 ST05G007720 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G007720 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | many-to-1 | TP2G15040 | 1 | |
| Anchor point | many-to-many | TP1G11830 TP1G22720 TP2G15040 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G15040 | 1 | ||
| Theobroma cacao | Tree-based ortholog | many-to-1 | TC0002G35610 | 1 | |
| Anchor point | many-to-many | TC0002G35610 TC0003G03190 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G03190 | 1 | ||
| Vitis vinifera | Tree-based ortholog | many-to-1 | VV01G08000 | 1 | |
| Anchor point | many-to-1 | VV01G08000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV17G05840 | 1 | ||
| Zea mays | Tree-based ortholog | many-to-many | ZM09G05770 ZM06G07640 ZM09G13740 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G07640 | 1 |