Integrative Orthology Viewer: BR06G30850 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR06G30850 BR09G04680 | 2 | |
Tree-based ortholog | BR02G34990 BR09G04680 BR06G30850 | 3 | ||
Anchor point | BR05G34050 BR09G04680 BR02G34990 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | BR06G30850 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00117G00170 | 1 | |
Tree-based ortholog | many-to-many | ATR_00016G02270 ATR_00117G00170 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00117G00170 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL8G11650 | 1 | |
Tree-based ortholog | many-to-1 | AL8G11650 | 1 | ||
Anchor point | many-to-many | AL8G11650 AL3G07570 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G11650 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT5G48655 | 1 | |
Tree-based ortholog | many-to-1 | AT5G48655 | 1 | ||
Anchor point | many-to-many | AT5G48655 AT3G07200 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G48655 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV0G03860 | 1 | |
Tree-based ortholog | many-to-1 | BV0G03860 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G03860 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_008G08230 | 1 | |
Tree-based ortholog | many-to-1 | CRU_008G08230 | 1 | ||
Anchor point | many-to-many | CRU_003G06430 CRU_008G08230 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G08230 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00008G01190 | 1 | |
Tree-based ortholog | many-to-1 | CP00008G01190 | 1 | ||
Anchor point | many-to-1 | CP00008G01190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00008G01190 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR07G05980 | 1 | |
Citrullus lanatus | Orthologous gene family | many-to-many | CL07G00300 CL07G00310 | 2 | |
Tree-based ortholog | many-to-1 | CL07G00310 | 1 | ||
Anchor point | many-to-many | CL05G03510 CL07G00300 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G00300 | 1 | ||
Citrus sinensis | Tree-based ortholog | many-to-many | CS00374G00120 CS00058G00410 CS07180G00010 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00374G00120 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00054G00730 | 1 | |
Tree-based ortholog | many-to-1 | CM00054G00730 | 1 | ||
Anchor point | many-to-1 | CM00006G03940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00054G00730 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0011G17670 | 1 | |
Tree-based ortholog | many-to-1 | EG0011G17670 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G17670 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV2G14460 | 1 | |
Tree-based ortholog | many-to-many | FV4G16850 FV4G16870 FV2G14460 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G14460 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM11G11050 GM12G03250 | 2 | |
Tree-based ortholog | many-to-1 | GM20G00720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM11G11050 GM12G03250 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G18810 GR01G23180 GR07G15620 | 3 | |
Tree-based ortholog | many-to-many | GR01G23180 GR01G18810 GR07G15620 | 3 | ||
Anchor point | many-to-many | GR01G23180 GR07G15620 GR01G18810 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR01G23180 GR07G15620 GR01G18810 | 3 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G155230 MD05G016020 | 2 | |
Tree-based ortholog | many-to-many | MD00G155230 MD05G016020 | 2 | ||
Anchor point | many-to-1 | MD05G016020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD05G016020 MD00G155230 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME07528G00350 ME07827G00070 | 2 | |
Tree-based ortholog | many-to-many | ME07528G00350 ME07827G00070 | 2 | ||
Anchor point | many-to-1 | ME02421G00740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME07528G00350 ME07827G00070 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT4G074240 MT5G054550 | 2 | |
Tree-based ortholog | many-to-1 | MT5G054550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G074240 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS01G69040 | 1 | |
Tree-based ortholog | many-to-many | OS09G32690 OS01G69040 | 2 | ||
Anchor point | many-to-1 | OS09G32690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G69040 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL12G00930 | 1 | |
Tree-based ortholog | many-to-1 | OL12G00930 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL12G00930 | 1 | ||
Physcomitrella patens | Tree-based ortholog | many-to-many | PP00003G00890 PP00369G00190 PP00491G00080 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00003G00890 PP00121G00110 PP00369G00190 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT02G24550 PT14G19140 | 2 | |
Tree-based ortholog | many-to-many | PT02G24550 PT14G19140 | 2 | ||
Anchor point | many-to-1 | PT02G24550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT14G19140 PT02G24550 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_008G21490 | 1 | |
Tree-based ortholog | many-to-many | PPE_001G15400 PPE_001G15410 PPE_008G21490 | 3 | ||
Anchor point | many-to-1 | PPE_008G21490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G21490 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30217G00150 | 1 | |
Tree-based ortholog | many-to-1 | RC30217G00150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30217G00150 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL06G007870 SL09G059450 | 2 | |
Tree-based ortholog | many-to-many | SL09G059450 SL06G007870 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G059450 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST09G014880 | 1 | |
Tree-based ortholog | many-to-1 | ST09G014880 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G014880 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP2G19060 | 1 | |
Tree-based ortholog | many-to-1 | TP2G19060 | 1 | ||
Anchor point | many-to-many | TP2G19060 TP3G06150 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G19060 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0001G21600 | 1 | |
Tree-based ortholog | many-to-1 | TC0001G21600 | 1 | ||
Anchor point | many-to-1 | TC0001G21600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G21600 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV00G20760 | 1 | |
Tree-based ortholog | many-to-many | VV05G07000 VV00G20760 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV00G20760 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM03G22970 | 1 | |
Tree-based ortholog | many-to-many | ZM01G08260 ZM03G22970 ZM07G18800 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G22970 | 1 |