Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
BR06G13390
(Brassica rapa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Brassica rapa | Orthologous gene family | BR06G13390 BR09G46000 | 2 |  |
| Tree-based ortholog | BR06G13390 | 1 | ||
| Anchor point | BR09G45980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | BR06G13390 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00010G05100 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00010G05100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00010G05100 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL1G19680 | 1 | |
| Tree-based ortholog | 1-to-1 | AL1G19680 | 1 | ||
| Anchor point | 1-to-1 | AL1G19680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G19680 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT1G18730 | 1 | |
| Tree-based ortholog | 1-to-1 | AT1G18730 | 1 | ||
| Anchor point | 1-to-1 | AT1G18730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G18730 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV5G00590 | 1 | |
| Tree-based ortholog | 1-to-1 | BV5G00590 | 1 | ||
| Anchor point | 1-to-1 | BV5G00590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G00590 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_001G17590 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_001G17590 | 1 | ||
| Anchor point | 1-to-1 | CRU_001G17590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G17590 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00111G00210 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00111G00210 | 1 | ||
| Anchor point | 1-to-1 | CP00111G00210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00111G00210 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL06G16670 | 1 | |
| Tree-based ortholog | 1-to-1 | CL06G16670 | 1 | ||
| Anchor point | 1-to-1 | CL06G16670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G16670 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00111G00260 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00111G00260 | 1 | ||
| Anchor point | 1-to-1 | CS00111G00260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00111G00260 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00030G01050 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00030G01050 | 1 | ||
| Anchor point | 1-to-1 | CM00030G01050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00030G01050 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0011G20710 EG0011G20730 | 2 | |
| Tree-based ortholog | 1-to-many | EG0011G20710 EG0011G20730 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0011G20710 EG0011G20730 | 2 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV5G12980 | 1 | |
| Tree-based ortholog | 1-to-1 | FV5G12980 | 1 | ||
| Anchor point | 1-to-1 | FV5G12980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G12980 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM04G33290 GM06G20990 | 2 | |
| Tree-based ortholog | 1-to-many | GM06G20990 GM04G33290 | 2 | ||
| Anchor point | 1-to-many | GM06G20990 GM04G33290 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM06G20990 GM04G33290 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR03G09780 | 1 | |
| Tree-based ortholog | 1-to-1 | GR03G09780 | 1 | ||
| Anchor point | 1-to-1 | GR03G09780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR03G09780 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD14G019320 | 1 | |
| Tree-based ortholog | 1-to-many | MD06G015840 MD14G019320 | 2 | ||
| Anchor point | 1-to-many | MD06G015840 MD14G019320 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD14G019320 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME12794G02280 | 1 | |
| Tree-based ortholog | 1-to-many | ME12794G02300 ME12794G02280 | 2 | ||
| Anchor point | 1-to-1 | ME12794G02280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME12794G02280 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT3G435320 | 1 | |
| Tree-based ortholog | 1-to-1 | MT3G435320 | 1 | ||
| Anchor point | 1-to-1 | MT3G435320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G435320 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS02G51020 | 1 | |
| Tree-based ortholog | 1-to-1 | OS02G51020 | 1 | ||
| Anchor point | 1-to-1 | OS02G51020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G51020 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-1 | PP00127G00490 | 1 | |
| Tree-based ortholog | 1-to-1 | PP00127G00490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00127G00490 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-1 | PT12G06850 | 1 | |
| Tree-based ortholog | 1-to-1 | PT12G06850 | 1 | ||
| Anchor point | 1-to-1 | PT12G06850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT12G06850 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_005G20020 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_005G20020 | 1 | ||
| Anchor point | 1-to-1 | PPE_005G20020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G20020 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30138G02250 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30138G02250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30138G02250 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL12G036170 | 1 | |
| Tree-based ortholog | 1-to-1 | SL12G036170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL12G036170 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST12G015660 | 1 | |
| Tree-based ortholog | 1-to-1 | ST12G015660 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST12G015660 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP1G16740 | 1 | |
| Tree-based ortholog | 1-to-1 | TP1G16740 | 1 | ||
| Anchor point | 1-to-1 | TP1G16740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G16740 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0003G09390 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0003G09390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G09390 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV00G10380 VV00G13110 | 2 | |
| Tree-based ortholog | 1-to-many | VV00G10380 VV00G13110 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV00G10380 VV00G13110 | 2 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM05G40170 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM05G40170 | 1 | ||
| Anchor point | 1-to-1 | ZM05G40170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G40170 | 1 |