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Integrative Orthology Viewer:
BR05G27490
(Brassica rapa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Brassica rapa | Orthologous gene family | BR01G33250 BR03G34430 BR05G27490 | 3 |  |
| Tree-based ortholog | BR05G27490 BR01G33250 | 2 | ||
| Anchor point | BR06G01560 BR03G34430 BR01G33250 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | BR05G27490 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00122G00050 | 1 | |
| Tree-based ortholog | many-to-1 | ATR_00122G00050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00002G05090 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL3G16510 | 1 | |
| Tree-based ortholog | many-to-1 | AL3G16510 | 1 | ||
| Anchor point | many-to-many | AL1G47850 AL2G29410 AL3G16510 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G16510 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT3G15540 | 1 | |
| Tree-based ortholog | many-to-1 | AT3G15540 | 1 | ||
| Anchor point | many-to-many | AT1G52830 AT3G15540 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G15540 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV9G16360 | 1 | |
| Tree-based ortholog | many-to-1 | BV9G16360 | 1 | ||
| Anchor point | many-to-1 | BV9G16360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV9G16360 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_003G14550 | 1 | |
| Tree-based ortholog | many-to-1 | CRU_003G14550 | 1 | ||
| Anchor point | many-to-many | CRU_003G14550 CRU_001G40040 CRU_002G25730 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G14550 | 1 | ||
| Carica papaya | Tree-based ortholog | many-to-many | CP01476G00010 CP00058G00290 CP00052G00870 | 3 | |
| Anchor point | many-to-1 | CP00010G01580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00010G01580 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL07G13210 | 1 | |
| Tree-based ortholog | many-to-many | CL07G13220 CL07G13210 | 2 | ||
| Anchor point | many-to-1 | CL07G13210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G13210 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00080G00090 | 1 | |
| Tree-based ortholog | many-to-1 | CS00080G00090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00080G00090 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00018G01810 CM00060G00120 | 2 | |
| Tree-based ortholog | many-to-many | CM00018G01800 CM00018G01810 CM00060G00120 | 3 | ||
| Anchor point | many-to-many | CM00060G00120 CM00018G01800 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00060G00120 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0006G21180 | 1 | |
| Tree-based ortholog | many-to-1 | EG0006G21180 | 1 | ||
| Anchor point | many-to-1 | EG0010G25710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G21180 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV6G16740 | 1 | |
| Tree-based ortholog | many-to-1 | FV6G16740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G16740 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM07G03840 GM08G22190 | 2 | |
| Tree-based ortholog | many-to-many | GM08G22190 GM07G03840 GM13G43780 ... | 4 | ||
| Anchor point | many-to-many | GM08G22190 GM15G01550 GM07G03840 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM08G22190 GM07G03840 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR09G13230 GR10G22780 | 2 | |
| Tree-based ortholog | many-to-many | GR09G13230 GR10G22780 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR10G22780 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ3G031200 | 1 | |
| Tree-based ortholog | many-to-1 | LJ3G031200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G031200 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD08G005450 | 1 | |
| Tree-based ortholog | many-to-1 | MD08G005450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD08G005450 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME02853G00280 | 1 | |
| Tree-based ortholog | many-to-many | ME02196G00070 ME02853G00280 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME02853G00280 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT4G011880 | 1 | |
| Tree-based ortholog | many-to-1 | MT4G011880 | 1 | ||
| Anchor point | many-to-many | MT2G102490 MT4G011880 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G011880 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | many-to-many | OS03G53150 OS03G43400 OS12G40890 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS12G40890 OS03G43400 | 2 | ||
| Physcomitrella patens | Tree-based ortholog | many-to-many | PP00073G00060 PP00184G00110 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00073G00060 PP00184G00110 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G17750 PT03G05690 | 2 | |
| Tree-based ortholog | many-to-many | PT01G17750 PT03G05690 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT03G05690 PT01G17750 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_003G06100 | 1 | |
| Tree-based ortholog | many-to-1 | PPE_003G06100 | 1 | ||
| Anchor point | many-to-1 | PPE_003G06100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G06100 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29841G00110 | 1 | |
| Tree-based ortholog | many-to-1 | RC29841G00110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29841G00110 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL03G120380 | 1 | |
| Tree-based ortholog | many-to-1 | SL03G120380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G120380 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST03G036670 | 1 | |
| Tree-based ortholog | many-to-many | ST03G036670 ST06G023310 | 2 | ||
| Anchor point | many-to-1 | ST06G023310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G036670 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP3G13810 | 1 | |
| Tree-based ortholog | many-to-1 | TP3G13810 | 1 | ||
| Anchor point | many-to-many | TP1G39420 TP3G13810 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G13810 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0006G08300 | 1 | |
| Tree-based ortholog | many-to-1 | TC0006G08300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0006G08300 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV09G05620 | 1 | |
| Tree-based ortholog | many-to-many | VV05G05920 VV14G15240 VV07G01540 | 3 | ||
| Anchor point | many-to-1 | VV09G05620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV07G01530 | 1 | ||
| Zea mays | Tree-based ortholog | many-to-many | ZM05G04490 ZM01G52350 ZM01G28860 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM05G04490 ZM01G52350 | 2 |