Integrative Orthology Viewer: BR05G18600 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR05G18600 BR05G25320 | 2 | |
Tree-based ortholog | BR05G18600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | BR05G18600 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00079G00910 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00079G00910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00079G00910 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G42460 AL3G19780 | 2 | |
Tree-based ortholog | 1-to-1 | AL1G42460 | 1 | ||
Anchor point | N/A | AL1G42460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G42460 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT1G48760 | 1 | |
Tree-based ortholog | 1-to-1 | AT1G48760 | 1 | ||
Anchor point | N/A | AT1G48760 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G48760 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV0G33030 | 1 | |
Tree-based ortholog | 1-to-1 | BV0G33030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G33030 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G35940 CRU_003G17260 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_001G35940 | 1 | ||
Anchor point | N/A | CRU_003G17260 CRU_001G35940 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G35940 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00003G04790 | 1 | |
Tree-based ortholog | 1-to-1 | CP00003G04790 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00003G04790 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G15500 | 1 | |
Citrullus lanatus | Orthologous gene family | many-to-1 | CL04G10920 | 1 | |
Tree-based ortholog | 1-to-1 | CL04G10920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL04G10920 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00389G00080 | 1 | |
Tree-based ortholog | 1-to-1 | CS00389G00080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00389G00080 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00001G01890 | 1 | |
Tree-based ortholog | 1-to-1 | CM00001G01890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00001G01890 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0011G18480 | 1 | |
Tree-based ortholog | 1-to-1 | EG0011G18480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G18480 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV5G35810 | 1 | |
Tree-based ortholog | 1-to-1 | FV5G35810 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G35810 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM05G34740 GM08G04940 | 2 | |
Tree-based ortholog | 1-to-many | GM05G34740 GM08G04940 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM05G34740 GM08G04940 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR08G28740 | 1 | |
Tree-based ortholog | 1-to-1 | GR08G28740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G28740 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ6G010500 | 1 | |
Tree-based ortholog | 1-to-1 | LJ6G010500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G010500 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD06G018290 MD14G021380 | 2 | |
Tree-based ortholog | 1-to-many | MD14G021380 MD06G018290 | 2 | ||
Anchor point | N/A | MD14G021380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD06G018290 MD14G021380 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME09357G00010 | 1 | |
Tree-based ortholog | 1-to-1 | ME09357G00010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME09357G00010 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT8G104380 | 1 | |
Tree-based ortholog | 1-to-1 | MT8G104380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G104380 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS01G32880 | 1 | |
Tree-based ortholog | 1-to-1 | OS01G32880 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G32880 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL19G00700 | 1 | |
Tree-based ortholog | 1-to-1 | OL19G00700 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL19G00700 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00229G00180 | 1 | |
Tree-based ortholog | 1-to-1 | PP00229G00180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00229G00180 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT12G05500 PT15G04560 | 2 | |
Tree-based ortholog | 1-to-many | PT12G05500 PT15G04560 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT12G05500 PT15G04560 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_005G22570 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_005G22570 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G22570 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29747G00620 | 1 | |
Tree-based ortholog | 1-to-1 | RC29747G00620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29747G00620 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL03G119270 | 1 | |
Tree-based ortholog | 1-to-1 | SL03G119270 | 1 | ||
Anchor point | N/A | SL03G119270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G119270 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST03G032800 | 1 | |
Tree-based ortholog | 1-to-1 | ST03G032800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G032800 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G35680 TP3G16410 | 2 | |
Tree-based ortholog | 1-to-1 | TP1G35680 | 1 | ||
Anchor point | N/A | TP1G35680 TP3G16410 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G35680 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0003G03630 | 1 | |
Tree-based ortholog | 1-to-1 | TC0003G03630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G03630 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV17G06240 | 1 | |
Tree-based ortholog | 1-to-1 | VV17G06240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV17G06240 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM03G17470 | 1 | |
Tree-based ortholog | 1-to-1 | ZM03G17470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G17470 | 1 |