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Integrative Orthology Viewer:
BR05G11500
(Brassica rapa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Brassica rapa | Orthologous gene family | BR05G11500 | 1 |  |
| Tree-based ortholog | BR04G19460 BR03G16300 BR05G11500 | 3 | ||
| Anchor point | BR03G16300 BR04G19460 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | BR05G11500 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | many-to-many | ATR_00067G01720 ATR_01954G00010 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00126G00330 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | many-to-1 | AL4G17800 | 1 | |
| Anchor point | many-to-1 | AL4G17800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G17800 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | many-to-1 | AT2G32710 | 1 | |
| Anchor point | many-to-1 | AT2G32710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G32710 | 1 | ||
| Beta vulgaris | Tree-based ortholog | many-to-1 | BV0G03660 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G14680 | 1 | ||
| Capsella rubella | Tree-based ortholog | many-to-1 | CRU_004G13620 | 1 | |
| Anchor point | many-to-1 | CRU_004G13620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G13620 | 1 | ||
| Carica papaya | Tree-based ortholog | many-to-1 | CP00494G00040 | 1 | |
| Anchor point | many-to-1 | CP00008G01520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00494G00040 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | many-to-many | CL06G07570 CL05G03680 | 2 | |
| Anchor point | many-to-many | CL05G03680 CL09G08520 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G07570 | 1 | ||
| Citrus sinensis | Tree-based ortholog | many-to-1 | CS00055G00100 | 1 | |
| Anchor point | many-to-1 | CS00055G00100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00055G00100 | 1 | ||
| Cucumis melo | Tree-based ortholog | many-to-many | CM00043G01220 CM00006G04110 | 2 | |
| Anchor point | many-to-many | CM00043G01220 CM00006G04110 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00043G01220 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | many-to-1 | EG0008G00620 | 1 | |
| Anchor point | many-to-1 | EG0008G00620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G00620 | 1 | ||
| Fragaria vesca | Tree-based ortholog | many-to-1 | FV4G07920 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G07920 | 1 | ||
| Glycine max | Tree-based ortholog | many-to-1 | GM20G34090 | 1 | |
| Anchor point | many-to-1 | GM18G36820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM20G34090 | 1 | ||
| Gossypium raimondii | Tree-based ortholog | many-to-many | GR06G22180 GR06G22190 GR09G33920 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR06G22190 GR06G22180 | 2 | ||
| Lotus japonicus | Tree-based ortholog | many-to-1 | LJ4G012370 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G024050 | 1 | ||
| Malus domestica | Tree-based ortholog | many-to-many | MD00G292240 MD09G015140 | 2 | |
| Anchor point | many-to-1 | MD09G015140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD09G015140 | 1 | ||
| Manihot esculenta | Tree-based ortholog | many-to-many | ME03332G01420 ME02421G00440 | 2 | |
| Anchor point | many-to-many | ME03332G01420 ME02421G00440 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME03332G01420 ME02421G00440 | 2 | ||
| Medicago truncatula | Tree-based ortholog | many-to-1 | MT1G072860 | 1 | |
| Anchor point | many-to-1 | MT7G057920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT7G057920 MT7G058390 | 2 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | many-to-many | OS03G04490 OS10G33310 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G04490 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00148G00550 | 1 | |
| Populus trichocarpa | Tree-based ortholog | many-to-many | PT01G31400 PT17G05400 | 2 | |
| Anchor point | many-to-1 | PT17G05400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT02G24210 | 1 | ||
| Prunus persica | Tree-based ortholog | many-to-1 | PPE_001G00600 | 1 | |
| Anchor point | many-to-many | PPE_008G21860 PPE_001G00600 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G00600 | 1 | ||
| Ricinus communis | Tree-based ortholog | many-to-1 | RC29904G00720 | 1 | |
| Anchor point | many-to-many | RC30204G00340 RC29904G00720 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29904G00720 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | many-to-many | SL09G091780 SL12G098310 | 2 | |
| Anchor point | many-to-many | SL09G061280 SL12G098310 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL12G098310 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | many-to-many | ST09G028290 ST12G030040 | 2 | |
| Anchor point | many-to-many | ST09G028290 ST12G030040 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST12G030040 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | many-to-1 | TP4G15050 | 1 | |
| Anchor point | many-to-many | TP4G15050 TP2G19210 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G15050 | 1 | ||
| Theobroma cacao | Tree-based ortholog | many-to-1 | TC0004G20990 | 1 | |
| Anchor point | many-to-1 | TC0004G20990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G20990 | 1 | ||
| Vitis vinifera | Tree-based ortholog | many-to-1 | VV05G07510 | 1 | |
| Anchor point | many-to-many | VV05G07510 VV07G12880 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV07G12880 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-many | ZM01G42350 ZM05G10250 | 2 | |
| Tree-based ortholog | many-to-many | ZM01G02910 ZM09G28210 ZM01G42350 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM05G10250 ZM01G42350 | 2 |