Integrative Orthology Viewer: BR05G00500 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR03G23000 BR05G00500 | 2 | |
Tree-based ortholog | BR05G00500 BR03G23000 | 2 | ||
Anchor point | BR03G23000 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | BR03G23000 BR05G00500 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00029G01860 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00029G01860 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00029G01860 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL4G35620 | 1 | |
Tree-based ortholog | many-to-1 | AL4G35620 | 1 | ||
Anchor point | 1-to-1 | AL4G35620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL4G35620 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT2G47420 | 1 | |
Tree-based ortholog | many-to-1 | AT2G47420 | 1 | ||
Anchor point | 1-to-1 | AT2G47420 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G47420 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV5G14950 | 1 | |
Tree-based ortholog | many-to-1 | BV5G14950 | 1 | ||
Anchor point | 1-to-1 | BV5G14950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV5G14950 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_004G29020 CRU_007G31660 | 2 | |
Tree-based ortholog | many-to-many | CRU_007G31660 CRU_004G29020 | 2 | ||
Anchor point | 1-to-1 | CRU_004G29020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_004G29020 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00026G02130 | 1 | |
Tree-based ortholog | many-to-1 | CP00026G02130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00026G02130 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR01G09310 | 1 | |
Tree-based ortholog | many-to-1 | CR01G09310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR01G09310 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL00G03020 CL11G09610 | 2 | |
Tree-based ortholog | many-to-many | CL00G03020 CL11G09610 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL11G09610 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00001G06660 | 1 | |
Tree-based ortholog | many-to-1 | CS00001G06660 | 1 | ||
Anchor point | 1-to-1 | CS00001G06660 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00001G06660 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00012G01680 | 1 | |
Tree-based ortholog | many-to-1 | CM00012G01680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00012G01680 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0007G09950 EG0008G26060 EG0011G28990 | 3 | |
Tree-based ortholog | many-to-many | EG0008G26060 EG0007G09950 EG0011G28990 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | EG0008G26060 EG0011G28990 | 2 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV5G34890 | 1 | |
Tree-based ortholog | many-to-1 | FV5G34890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV5G34890 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM06G47391 GM13G18570 | 2 | |
Tree-based ortholog | many-to-many | GM13G18570 GM06G47391 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM13G18570 GM06G47391 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR01G14400 | 1 | |
Tree-based ortholog | many-to-1 | GR01G14400 | 1 | ||
Anchor point | 1-to-1 | GR01G14400 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR01G14400 | 1 | ||
Lotus japonicus | Tree-based ortholog | many-to-1 | LJ2G030020 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ2G030020 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G380000 MD11G028790 | 2 | |
Tree-based ortholog | many-to-many | MD00G380000 MD11G028790 MD00G432170 | 3 | ||
Anchor point | 1-to-1 | MD11G028790 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD11G028790 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME05434G00040 | 1 | |
Tree-based ortholog | many-to-1 | ME05434G00040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME05434G00040 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT3G007750 | 1 | |
Tree-based ortholog | many-to-1 | MT3G007750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT3G007750 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS10G10434 | 1 | |
Tree-based ortholog | many-to-1 | OS10G10434 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS10G10434 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL08G02760 | 1 | |
Tree-based ortholog | many-to-1 | OL08G02760 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL08G02760 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00112G00450 | 1 | |
Tree-based ortholog | many-to-many | PP00112G00450 PP00391G00070 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00112G00450 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-1 | PT14G12120 | 1 | |
Tree-based ortholog | many-to-1 | PT14G12120 | 1 | ||
Anchor point | 1-to-1 | PT14G12120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT14G12120 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G55130 PPE_008G28370 | 2 | |
Tree-based ortholog | many-to-many | PPE_008G28370 PPE_001G55130 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PPE_001G55130 PPE_008G28370 | 2 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC28883G00200 | 1 | |
Tree-based ortholog | many-to-1 | RC28883G00200 | 1 | ||
Anchor point | 1-to-1 | RC30076G02240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC28883G00200 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL01G100430 | 1 | |
Tree-based ortholog | many-to-1 | SL01G100430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G100430 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST01G038260 | 1 | |
Tree-based ortholog | many-to-1 | ST01G038260 | 1 | ||
Anchor point | 1-to-1 | ST01G038260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST01G038260 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP4G29370 | 1 | |
Tree-based ortholog | many-to-1 | TP4G29370 | 1 | ||
Anchor point | 1-to-1 | TP4G29370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP4G29370 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0001G31110 | 1 | |
Tree-based ortholog | many-to-1 | TC0001G31110 | 1 | ||
Anchor point | 1-to-1 | TC0001G31110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0001G31110 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV07G09220 | 1 | |
Tree-based ortholog | many-to-1 | VV07G09220 | 1 | ||
Anchor point | 1-to-1 | VV07G09220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV07G09220 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM05G20870 | 1 | |
Tree-based ortholog | many-to-1 | ZM05G20870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM05G20870 | 1 |