Integrative Orthology Viewer: BR04G27510 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR04G27510 BR05G05500 | 2 | |
Tree-based ortholog | BR05G05500 BR04G27510 | 2 | ||
Anchor point | BR05G05500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | BR04G27510 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00001G03150 ATR_00001G03160 | 2 | |
Tree-based ortholog | many-to-many | ATR_00001G03160 ATR_00001G03150 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00001G03160 ATR_00001G03150 | 2 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL4G34070 | 1 | |
Tree-based ortholog | many-to-1 | AL4G34070 | 1 | ||
Anchor point | 1-to-1 | AL4G34070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G34070 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT2G46080 | 1 | |
Tree-based ortholog | many-to-1 | AT2G46080 | 1 | ||
Anchor point | 1-to-many | AT3G61500 AT1G01550 AT2G46080 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G46080 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV1G06150 | 1 | |
Tree-based ortholog | many-to-1 | BV1G06150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV1G06150 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G00630 CRU_004G27740 | 2 | |
Tree-based ortholog | many-to-1 | CRU_004G27740 | 1 | ||
Anchor point | 1-to-many | CRU_004G27740 CRU_001G00630 CRU_005G26770 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G27740 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00184G00170 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00184G00170 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL05G01610 CL06G02310 | 2 | |
Tree-based ortholog | many-to-many | CL05G01610 CL06G02310 | 2 | ||
Anchor point | 1-to-1 | CL05G01610 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G02310 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00001G03480 | 1 | |
Tree-based ortholog | many-to-1 | CS00001G03480 | 1 | ||
Anchor point | 1-to-1 | CS00001G03480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00001G03480 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00006G01720 CM00047G00500 | 2 | |
Tree-based ortholog | many-to-many | CM00006G01720 CM00047G00500 | 2 | ||
Anchor point | 1-to-many | CM00047G00500 CM00006G01720 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00047G00500 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0004G19100 | 1 | |
Tree-based ortholog | many-to-1 | EG0004G19100 | 1 | ||
Anchor point | 1-to-1 | EG0004G19100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0004G19100 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV7G07250 | 1 | |
Tree-based ortholog | many-to-1 | FV7G07250 | 1 | ||
Anchor point | 1-to-1 | FV7G07250 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G07250 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM09G39170 GM18G47160 | 2 | |
Tree-based ortholog | many-to-many | GM11G30540 GM03G24390 GM18G17013 ... | 6 | ||
Anchor point | 1-to-many | GM07G07240 GM09G39170 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM09G39170 GM18G47160 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR07G10230 GR08G12000 | 2 | |
Tree-based ortholog | many-to-many | GR07G10230 GR08G12000 | 2 | ||
Anchor point | 1-to-many | GR08G12000 GR07G10230 GR04G15950 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G12000 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G034710 | 1 | |
Tree-based ortholog | many-to-1 | LJ1G034710 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G034710 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G088070 MD00G229560 MD01G005970 ... | 4 | |
Tree-based ortholog | many-to-many | MD01G005970 MD00G229560 MD00G088070 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD07G011200 MD00G229560 MD01G005970 ... | 4 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME02658G00970 ME03581G01470 | 2 | |
Tree-based ortholog | many-to-many | ME02658G00970 ME03581G01470 | 2 | ||
Anchor point | 1-to-many | ME03581G01470 ME02658G00970 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME03581G01470 ME02658G00970 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT7G078700 | 1 | |
Tree-based ortholog | many-to-many | MT8G028710 MT7G078700 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G078700 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS10G36950 | 1 | |
Tree-based ortholog | many-to-1 | OS10G36950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS10G36950 | 1 | ||
Physcomitrella patens | Tree-based ortholog | many-to-many | PP00405G00170 PP00166G00230 PP00013G00620 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00029G00280 PP00166G00230 PP00140G00220 ... | 5 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT02G16260 PT14G08860 | 2 | |
Tree-based ortholog | many-to-many | PT02G16260 PT14G08860 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT14G08860 PT02G16260 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_002G17070 | 1 | |
Tree-based ortholog | many-to-1 | PPE_002G17070 | 1 | ||
Anchor point | 1-to-1 | PPE_002G17070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G17070 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30174G03280 | 1 | |
Tree-based ortholog | many-to-1 | RC30174G03280 | 1 | ||
Anchor point | 1-to-1 | RC30174G03280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30174G03280 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL01G094950 | 1 | |
Tree-based ortholog | many-to-many | SL10G012070 SL01G094950 | 2 | ||
Anchor point | 1-to-1 | SL01G094950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G094950 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST01G032360 | 1 | |
Tree-based ortholog | many-to-many | ST10G010180 ST01G032360 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G032360 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP4G28140 | 1 | |
Tree-based ortholog | many-to-1 | TP4G28140 | 1 | ||
Anchor point | 1-to-many | TP4G28140 TP5G01900 TP1G00770 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G28140 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0001G35150 | 1 | |
Tree-based ortholog | many-to-1 | TC0001G35150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G35150 | 1 |