Integrative Orthology Viewer: BR04G22690 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR03G24070 BR04G22690 | 2 | |
Tree-based ortholog | BR05G07340 BR04G22690 | 2 | ||
Anchor point | BR05G07340 BR07G14090 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | BR04G22690 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00111G00150 ATR_00182G00320 | 2 | |
Tree-based ortholog | many-to-1 | ATR_00029G02500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00111G00150 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL6G41650 AL7G06100 | 2 | |
Tree-based ortholog | many-to-1 | AL4G24120 | 1 | ||
Anchor point | many-to-many | AL5G24110 AL4G24120 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G00260 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT4G00040 AT4G34850 | 2 | |
Tree-based ortholog | many-to-1 | AT2G37960 | 1 | ||
Anchor point | many-to-many | AT3G54060 AT2G37960 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G02050 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV0G64690 | 1 | |
Tree-based ortholog | many-to-1 | BV8G15090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G64690 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_006G35910 | 1 | |
Tree-based ortholog | many-to-1 | CRU_004G19310 | 1 | ||
Anchor point | many-to-1 | CRU_004G19310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G35910 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00037G01950 CP00101G00480 | 2 | |
Tree-based ortholog | many-to-1 | CP00056G00700 | 1 | ||
Anchor point | many-to-1 | CP00056G00700 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00101G00480 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL02G04490 CL05G00430 | 2 | |
Tree-based ortholog | many-to-1 | CL10G19700 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G00430 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00001G01010 | 1 | |
Tree-based ortholog | many-to-1 | CS00083G00460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00001G01010 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00013G01580 CM00030G00510 | 2 | |
Tree-based ortholog | many-to-1 | CM00011G01240 | 1 | ||
Anchor point | many-to-1 | CM00011G01240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00013G01580 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0004G20910 EG0009G11080 | 2 | |
Tree-based ortholog | many-to-1 | EG0001G04110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0004G20910 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV2G06410 FV7G13870 | 2 | |
Tree-based ortholog | many-to-1 | FV6G11540 | 1 | ||
Anchor point | many-to-1 | FV6G11540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G13870 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G13900 GM11G10380 GM12G02670 | 3 | |
Tree-based ortholog | many-to-many | GM01G26860 GM01G26900 GM01G35720 ... | 7 | ||
Anchor point | many-to-many | GM07G17190 GM18G41950 GM03G15085 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM01G13900 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR04G16500 GR08G03330 | 2 | |
Tree-based ortholog | many-to-many | GR02G25970 GR12G11020 | 2 | ||
Anchor point | many-to-many | GR02G25970 GR12G11020 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G16500 | 1 | ||
Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | LJ4G040350 LJ4G040780 | 2 | |
Malus domestica | Tree-based ortholog | many-to-1 | MD04G011550 | 1 | |
Anchor point | many-to-1 | MD04G011550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD02G020110 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME03188G00040 ME04450G00350 | 2 | |
Tree-based ortholog | many-to-1 | ME03651G00320 | 1 | ||
Anchor point | many-to-1 | ME03651G00320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME04450G00350 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT4G075560 MT4G078730 | 2 | |
Tree-based ortholog | many-to-many | MT4G019040 MT7G066170 | 2 | ||
Anchor point | many-to-1 | MT7G066170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G078730 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS07G22850 | 1 | |
Tree-based ortholog | many-to-1 | OS03G01008 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G22850 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00304G00330 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00304G00330 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT02G14140 PT14G05630 | 2 | |
Tree-based ortholog | many-to-many | PT16G10910 PT16G10710 PT06G09460 | 3 | ||
Anchor point | many-to-many | PT06G09460 PT16G10710 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT02G14140 PT14G05630 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_002G12670 PPE_008G17730 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G12670 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29711G00140 RC30174G00500 | 2 | |
Tree-based ortholog | many-to-1 | RC27798G00260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30174G00500 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G090600 SL01G111070 | 2 | |
Tree-based ortholog | many-to-many | SL09G011820 SL10G086740 SL10G086750 | 3 | ||
Anchor point | many-to-1 | SL10G086740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G111070 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G029760 ST01G048480 | 2 | |
Tree-based ortholog | many-to-many | ST09G012110 ST10G027760 | 2 | ||
Anchor point | many-to-many | ST10G027760 ST09G012110 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G029760 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G00260 TP6G00100 | 2 | |
Tree-based ortholog | many-to-1 | TP4G20270 | 1 | ||
Anchor point | many-to-many | TP5G08320 TP4G20270 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G00260 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0001G38340 | 1 | |
Tree-based ortholog | many-to-1 | TC0005G02420 | 1 | ||
Anchor point | many-to-1 | TC0005G02420 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G38340 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV15G00770 | 1 | |
Tree-based ortholog | many-to-1 | VV08G13510 | 1 | ||
Anchor point | many-to-1 | VV08G13510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV15G00770 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM07G06980 | 1 | |
Tree-based ortholog | many-to-1 | ZM07G00110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM07G06980 | 1 |