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Integrative Orthology Viewer:
BR04G20890
(Brassica rapa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Brassica rapa | Orthologous gene family | BR04G20890 | 1 |  |
| Tree-based ortholog | BR03G17360 BR05G09440 BR04G20890 | 3 | ||
| Anchor point | BR05G09440 BR03G17360 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | BR04G20890 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00002G02430 | 1 | |
| Tree-based ortholog | many-to-many | ATR_00073G00470 ATR_00002G02430 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00002G02430 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | many-to-1 | AL4G20560 | 1 | |
| Anchor point | many-to-many | AL4G20560 AL1G33920 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G20560 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | many-to-1 | AT2G35230 | 1 | |
| Anchor point | many-to-many | AT2G35230 AT1G32610 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G35230 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV5G04590 | 1 | |
| Tree-based ortholog | many-to-1 | BV5G04590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G04590 | 1 | ||
| Capsella rubella | Tree-based ortholog | many-to-1 | CRU_004G16350 | 1 | |
| Anchor point | many-to-many | CRU_004G16350 CRU_001G29570 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G16350 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00071G00560 | 1 | |
| Tree-based ortholog | many-to-1 | CP00071G00560 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00071G00560 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-many | CL09G11570 CL10G00500 | 2 | |
| Tree-based ortholog | many-to-1 | CL10G00500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G11570 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00339G00010 | 1 | |
| Tree-based ortholog | many-to-1 | CS00339G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00339G00010 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-many | CM00021G01600 CM01596G01220 | 2 | |
| Tree-based ortholog | many-to-1 | CM00021G01600 | 1 | ||
| Anchor point | many-to-1 | CM00021G01600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00021G01600 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0004G18070 | 1 | |
| Tree-based ortholog | many-to-1 | EG0004G18070 | 1 | ||
| Anchor point | many-to-1 | EG0004G18070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0004G18070 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV4G18380 | 1 | |
| Tree-based ortholog | many-to-1 | FV4G18380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G18380 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-1 | GM01G02280 | 1 | |
| Tree-based ortholog | many-to-many | GM01G02280 GM08G36740 GM08G36730 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM01G02280 | 1 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR03G18180 | 1 | |
| Tree-based ortholog | many-to-many | GR04G18540 GR06G21650 GR03G18180 | 3 | ||
| Anchor point | many-to-1 | GR03G18180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR03G18180 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ2G026380 | 1 | |
| Tree-based ortholog | many-to-many | LJ2G026380 LJ3G044270 LJ1G005700 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G026380 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-1 | MD14G010060 | 1 | |
| Tree-based ortholog | many-to-many | MD00G003300 MD14G010060 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G003300 MD14G010060 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME00080G00410 | 1 | |
| Tree-based ortholog | many-to-1 | ME07571G00670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME00080G00410 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT5G030570 | 1 | |
| Tree-based ortholog | many-to-1 | MT5G030570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G030570 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT01G14240 PT03G09180 | 2 | |
| Tree-based ortholog | many-to-many | PT03G09180 PT01G14240 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT01G14240 PT03G09180 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_005G04030 | 1 | |
| Tree-based ortholog | many-to-1 | PPE_005G04030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G04030 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30076G01290 | 1 | |
| Tree-based ortholog | many-to-1 | RC30076G01290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30076G01290 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL06G061190 | 1 | |
| Tree-based ortholog | many-to-1 | SL06G061190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G061190 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-many | ST06G021360 ST08G021310 | 2 | |
| Tree-based ortholog | many-to-many | ST06G021360 ST08G021310 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST08G021310 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | many-to-1 | TP4G17450 | 1 | |
| Anchor point | many-to-1 | TP4G17450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G17450 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0003G22670 | 1 | |
| Tree-based ortholog | many-to-1 | TC0003G22670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G22670 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV02G02290 | 1 | |
| Tree-based ortholog | many-to-1 | VV02G02290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV02G02290 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM01G22550 | 1 | |
| Tree-based ortholog | many-to-1 | ZM01G22550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G22550 | 1 |