Integrative Orthology Viewer: BR04G17810 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR04G17810 BR10G01200 | 2 | |
Tree-based ortholog | BR04G17810 | 1 | ||
Anchor point | BR10G01200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | BR04G17810 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00038G00530 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00038G00610 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00038G00610 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL1G06340 | 1 | |
Tree-based ortholog | 1-to-1 | AL4G15180 | 1 | ||
Anchor point | 1-to-many | AL1G06340 AL4G15180 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G15180 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G06800 AT2G30550 | 2 | |
Tree-based ortholog | 1-to-1 | AT2G30550 | 1 | ||
Anchor point | 1-to-many | AT1G06800 AT2G30550 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G30550 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV5G13050 | 1 | |
Tree-based ortholog | 1-to-1 | BV5G13050 | 1 | ||
Anchor point | 1-to-1 | BV5G13050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G13050 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G05760 CRU_004G11390 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_004G11390 | 1 | ||
Anchor point | 1-to-many | CRU_001G05760 CRU_004G11390 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G11390 | 1 | ||
Carica papaya | Tree-based ortholog | 1-to-1 | CP00052G00830 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00164G00120 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR09G06100 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR09G06100 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL09G07070 CL09G07090 | 2 | |
Tree-based ortholog | 1-to-1 | CL09G07070 | 1 | ||
Anchor point | 1-to-1 | CL09G07070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G07070 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00132G00100 | 1 | |
Tree-based ortholog | 1-to-1 | CS00022G00440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00022G00440 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00026G00830 CM00026G00840 CM00026G00880 | 3 | |
Tree-based ortholog | 1-to-many | CM00026G00830 CM00026G00840 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00026G00880 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0008G02000 EG0011G27960 | 2 | |
Tree-based ortholog | 1-to-1 | EG0011G27960 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G27960 | 1 | ||
Fragaria vesca | Tree-based ortholog | 1-to-1 | FV2G08060 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G08060 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM02G16050 GM03G31570 | 2 | |
Tree-based ortholog | 1-to-many | GM03G31570 GM02G16040 GM02G16020 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM02G16050 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR06G12760 | 1 | |
Tree-based ortholog | 1-to-many | GR07G14210 GR04G07470 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G07470 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ5G019600 | 1 | |
Tree-based ortholog | 1-to-many | LJ5G019550 LJ5G019600 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G019550 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD10G015390 | 1 | |
Tree-based ortholog | 1-to-many | MD00G217970 MD05G013180 MD10G015390 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD05G013180 MD00G217970 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME10963G00210 | 1 | |
Tree-based ortholog | 1-to-1 | ME11998G00200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME11998G00200 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT7G096120 MT7G096140 | 2 | |
Tree-based ortholog | 1-to-many | MT7G096120 MT7G096140 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT7G096140 MT7G096120 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS05G32380 | 1 | |
Tree-based ortholog | 1-to-1 | OS05G32380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G32380 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL01G01170 | 1 | |
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00028G01190 PP00251G00190 PP00251G00200 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00201G00410 PP00013G01360 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-1 | PT09G05190 | 1 | |
Tree-based ortholog | 1-to-many | PT05G21850 PT02G04470 | 2 | ||
Anchor point | 1-to-1 | PT02G04470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT02G04470 PT05G21850 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_004G26220 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_008G24590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G24590 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29883G00500 | 1 | |
Tree-based ortholog | 1-to-1 | RC29883G00500 | 1 | ||
Anchor point | 1-to-1 | RC29883G00500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30169G02300 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL11G065530 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G065530 | 1 | ||
Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST09G020710 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G020710 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP1G05540 | 1 | |
Tree-based ortholog | 1-to-1 | TP4G13100 | 1 | ||
Anchor point | 1-to-many | TP4G13100 TP1G05540 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G13100 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0004G24770 TC0009G23330 | 2 | |
Tree-based ortholog | 1-to-1 | TC0001G26520 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G26520 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV07G01570 | 1 | |
Tree-based ortholog | 1-to-1 | VV07G01570 | 1 | ||
Anchor point | 1-to-1 | VV07G01570 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV07G01570 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM08G17160 | 1 | |
Tree-based ortholog | 1-to-many | ZM03G02690 ZM06G09110 ZM08G17160 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G17160 | 1 |