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Integrative Orthology Viewer:
BR03G54460
(Brassica rapa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Brassica rapa | Orthologous gene family | BR01G03360 BR03G54460 BR08G13670 | 3 |  |
| Tree-based ortholog | BR03G54460 BR01G03360 | 2 | ||
| Anchor point | BR08G13670 BR01G03360 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | BR03G54460 BR08G13670 BR01G03360 | 3 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | many-to-1 | ATR_00182G00320 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00182G00320 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL1G00260 | 1 | |
| Tree-based ortholog | many-to-1 | AL7G06100 | 1 | ||
| Anchor point | many-to-1 | AL7G06100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL7G06100 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT1G02050 | 1 | |
| Tree-based ortholog | many-to-1 | AT4G34850 | 1 | ||
| Anchor point | many-to-1 | AT4G34850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G34850 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV9G02960 | 1 | |
| Tree-based ortholog | many-to-1 | BV9G02960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV9G02960 | 1 | ||
| Capsella rubella | Tree-based ortholog | many-to-1 | CRU_007G05130 | 1 | |
| Anchor point | many-to-1 | CRU_007G05130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_007G05130 | 1 | ||
| Carica papaya | Tree-based ortholog | many-to-1 | CP00037G01950 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00037G01950 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR17G05760 | 1 | |
| Citrullus lanatus | Tree-based ortholog | many-to-1 | CL02G04490 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL02G04490 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00450G00070 | 1 | |
| Tree-based ortholog | many-to-1 | CS00450G00070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00450G00070 | 1 | ||
| Cucumis melo | Tree-based ortholog | many-to-1 | CM00030G00510 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00030G00510 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | many-to-1 | EG0009G11080 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0009G11080 | 1 | ||
| Fragaria vesca | Tree-based ortholog | many-to-1 | FV2G06410 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV2G06410 | 1 | ||
| Glycine max | Tree-based ortholog | many-to-many | GM11G10380 GM12G02670 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GM11G10380 | 1 | ||
| Gossypium raimondii | Tree-based ortholog | many-to-1 | GR08G03330 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR08G03330 | 1 | ||
| Lotus japonicus | Tree-based ortholog | many-to-many | LJ1G012650 LJ1G052900 LJ3G008750 ... | 15 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | LJ4G040350 LJ4G040780 | 2 | ||
| Malus domestica | Tree-based ortholog | many-to-1 | MD02G020110 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD02G020110 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME03252G00210 | 1 | |
| Tree-based ortholog | many-to-many | ME03252G00210 ME03188G00040 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME03252G00210 | 1 | ||
| Medicago truncatula | Tree-based ortholog | many-to-1 | MT4G075560 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT4G075560 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS10G34360 | 1 | |
| Tree-based ortholog | many-to-1 | OS07G22850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS07G22850 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | many-to-1 | PP00304G00330 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00304G00330 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT04G16730 PT09G12880 | 2 | |
| Tree-based ortholog | many-to-many | PT04G16730 PT09G12880 | 2 | ||
| Anchor point | many-to-many | PT04G16730 PT09G12880 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT04G16730 PT09G12880 | 2 | ||
| Prunus persica | Tree-based ortholog | many-to-1 | PPE_008G17730 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_008G17730 | 1 | ||
| Ricinus communis | Tree-based ortholog | many-to-1 | RC29711G00140 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29711G00140 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | many-to-1 | SL01G111070 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G111070 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | many-to-1 | ST01G048480 | 1 | |
| Anchor point | many-to-1 | ST01G048480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST01G048480 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP7G32620 | 1 | |
| Tree-based ortholog | many-to-1 | TP7G32620 | 1 | ||
| Anchor point | many-to-1 | TP7G32620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP7G32620 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0002G06490 | 1 | |
| Tree-based ortholog | many-to-1 | TC0002G06490 | 1 | ||
| Anchor point | many-to-1 | TC0002G06490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0002G06490 | 1 | ||
| Vitis vinifera | Tree-based ortholog | many-to-1 | VV03G05390 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV15G00770 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G41780 ZM05G09820 | 2 | |
| Tree-based ortholog | many-to-1 | ZM07G06980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM07G06980 | 1 |