Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
BR03G47760
(Brassica rapa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Brassica rapa | Orthologous gene family | BR03G47760 | 1 |  |
| Tree-based ortholog | BR03G47760 | 1 | ||
| Anchor point | BR01G14190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | BR03G47760 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00001G05730 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00029G04400 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL7G17950 | 1 | |
| Anchor point | 1-to-1 | AL7G17950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G17950 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | 1-to-1 | AT4G24204 | 1 | |
| Anchor point | 1-to-1 | AT4G24204 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G24204 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-many | BV5G09570 BV7G04960 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G09570 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-many | CRU_004G19560 CRU_004G19570 CRU_006G00360 | 3 | |
| Anchor point | 1-to-1 | CRU_007G15980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G15980 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00006G00700 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00006G00700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00006G00700 | 1 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G00690 | 1 | |
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00004G04480 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00004G04480 | 1 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00067G01360 | 1 | |
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0009G05930 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0006G01210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G01210 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV1G17260 | 1 | |
| Tree-based ortholog | 1-to-1 | FV1G17260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G31150 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM06G04705 GM04G04651 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM04G04651 GM06G04705 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR03G02770 | 1 | |
| Tree-based ortholog | 1-to-1 | GR05G10050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR03G02770 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ5G003810 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G003810 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-1 | MD15G023090 | 1 | |
| Tree-based ortholog | 1-to-many | MD00G437390 MD15G002290 MD08G010320 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD08G010320 MD00G437390 MD15G002290 | 3 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-1 | ME03237G00520 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03237G00520 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-1 | MT1G018650 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G018650 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS06G14200 | 1 | |
| Tree-based ortholog | 1-to-1 | OS06G14200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G14200 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00156G00380 PP00212G00300 PP00100G00290 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00100G00290 PP00156G00380 PP00212G00300 | 3 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT07G05050 | 1 | |
| Tree-based ortholog | 1-to-1 | PT14G02090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT14G02090 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_006G23500 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_001G43170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G43170 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC30170G01400 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30170G01400 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL02G092810 | 1 | |
| Tree-based ortholog | 1-to-1 | SL02G092810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G005320 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST02G031280 | 1 | |
| Tree-based ortholog | 1-to-1 | ST02G031280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G005350 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP7G22180 | 1 | |
| Anchor point | 1-to-1 | TP7G22180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G22180 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0001G06350 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0008G09040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G06350 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV07G00600 | 1 | |
| Tree-based ortholog | 1-to-1 | VV18G06350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G06350 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM09G27500 | 1 | |