Integrative Orthology Viewer: BR03G41670 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR03G41670 BR09G32520 | 2 | |
Tree-based ortholog | BR09G32520 BR03G41670 | 2 | ||
Anchor point | BR09G32520 BR04G13410 BR02G41560 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | BR09G32520 BR03G41670 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | many-to-1 | ATR_00059G01740 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00059G01740 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL5G20380 | 1 | |
Tree-based ortholog | many-to-1 | AL5G20380 | 1 | ||
Anchor point | many-to-many | AL5G20380 AL8G34090 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL5G20380 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT3G50800 | 1 | |
Tree-based ortholog | many-to-1 | AT3G50800 | 1 | ||
Anchor point | many-to-many | AT4G37240 AT5G66580 AT3G50800 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G50800 | 1 | ||
Beta vulgaris | Tree-based ortholog | many-to-1 | BV6G04750 | 1 | |
Anchor point | many-to-1 | BV6G04740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV6G04750 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_005G16030 | 1 | |
Tree-based ortholog | many-to-1 | CRU_005G16030 | 1 | ||
Anchor point | many-to-many | CRU_007G03180 CRU_008G27080 CRU_005G16030 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_005G16030 | 1 | ||
Carica papaya | Tree-based ortholog | many-to-many | CP01507G00010 CP00062G00920 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00062G00920 | 1 | ||
Citrullus lanatus | Tree-based ortholog | many-to-many | CL01G16570 CL02G13190 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL01G16570 | 1 | ||
Citrus sinensis | Tree-based ortholog | many-to-1 | CS00002G07350 | 1 | |
Anchor point | many-to-1 | CS00006G02900 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00167G00010 | 1 | ||
Cucumis melo | Tree-based ortholog | many-to-many | CM00007G05330 CM00045G01700 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00007G05330 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | many-to-many | EG0008G16020 EG0009G09810 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0008G16020 | 1 | ||
Fragaria vesca | Tree-based ortholog | many-to-many | FV2G00490 FV5G37530 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV5G37530 | 1 | ||
Glycine max | Tree-based ortholog | many-to-many | GM01G38720 GM11G06590 GM16G25840 ... | 4 | |
Anchor point | many-to-many | GM16G25840 GM02G06810 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM01G38720 GM11G06590 | 2 | ||
Gossypium raimondii | Tree-based ortholog | many-to-many | GR08G07110 GR07G20770 GR03G01910 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR03G01910 | 1 | ||
Lotus japonicus | Tree-based ortholog | many-to-1 | LJ2G031560 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ2G031560 | 1 | ||
Malus domestica | Tree-based ortholog | many-to-many | MD00G130410 MD00G133420 MD15G020270 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD00G133420 | 1 | ||
Manihot esculenta | Tree-based ortholog | many-to-many | ME04740G00060 ME08799G00160 ME09274G00150 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME05549G00030 ME09274G00150 | 2 | ||
Medicago truncatula | Tree-based ortholog | many-to-many | MT8G078790 MT5G018720 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT5G018720 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | many-to-many | OS09G31990 OS09G32000 OS02G09990 ... | 9 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS06G41940 | 1 | ||
Populus trichocarpa | Tree-based ortholog | many-to-many | PT09G11060 PT04G14960 PT07G03340 ... | 4 | |
Anchor point | many-to-1 | PT07G03340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT05G13020 PT07G03340 | 2 | ||
Prunus persica | Tree-based ortholog | many-to-many | PPE_008G12640 PPE_007G16780 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_007G16780 | 1 | ||
Ricinus communis | Tree-based ortholog | many-to-many | RC29851G01040 RC29851G01030 RC29676G00870 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29676G00870 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | many-to-many | SL02G089990 SL03G044860 SL02G065430 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL02G089990 | 1 | ||
Solanum tuberosum | Tree-based ortholog | many-to-many | ST02G032980 ST03G019320 ST02G012210 | 3 | |
Anchor point | many-to-1 | ST02G012210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST02G032980 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP5G11420 | 1 | |
Tree-based ortholog | many-to-1 | TP5G11420 | 1 | ||
Anchor point | many-to-many | TP7G34540 TP5G11420 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP5G11420 | 1 | ||
Theobroma cacao | Tree-based ortholog | many-to-1 | TC0001G04270 | 1 | |
Anchor point | many-to-1 | TC0001G04240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0001G04270 | 1 | ||
Vitis vinifera | Tree-based ortholog | many-to-many | VV00G07510 VV00G07530 VV03G07940 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV00G07510 VV00G07530 | 2 | ||
Zea mays | Tree-based ortholog | many-to-many | ZM07G18140 ZM05G23730 ZM06G13150 ... | 9 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM06G13150 ZM09G15090 | 2 |