Integrative Orthology Viewer: BR03G36230 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR03G36230 BR05G23450 | 2 | |
Tree-based ortholog | BR05G23450 BR03G36230 | 2 | ||
Anchor point | BR05G23450 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | BR03G36230 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00088G01230 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00088G01230 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00088G01230 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL3G21980 | 1 | |
Tree-based ortholog | many-to-1 | AL3G21980 | 1 | ||
Anchor point | 1-to-1 | AL3G21980 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G21980 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT3G20170 | 1 | |
Tree-based ortholog | many-to-1 | AT3G20170 | 1 | ||
Anchor point | 1-to-1 | AT3G20170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G20170 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV4G02240 | 1 | |
Tree-based ortholog | many-to-1 | BV4G02240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G02240 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_003G19180 | 1 | |
Tree-based ortholog | many-to-1 | CRU_003G19180 | 1 | ||
Anchor point | 1-to-1 | CRU_003G19180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G19180 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00012G01920 | 1 | |
Tree-based ortholog | many-to-1 | CP00012G01920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00012G01920 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL09G21440 | 1 | |
Tree-based ortholog | many-to-1 | CL09G21440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G21440 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00049G00910 | 1 | |
Tree-based ortholog | many-to-1 | CS00049G00910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00049G00910 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00072G00280 | 1 | |
Tree-based ortholog | many-to-1 | CM00072G00280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00072G00280 | 1 | ||
Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G22660 | 1 | |
Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G23210 | 1 | |
Glycine max | Orthologous gene family | many-to-1 | GM08G43800 | 1 | |
Tree-based ortholog | many-to-1 | GM08G43800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM08G43800 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR07G31100 | 1 | |
Tree-based ortholog | many-to-1 | GR07G31100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G31100 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ6G007460 LJ6G007650 | 2 | |
Tree-based ortholog | many-to-many | LJ6G007460 LJ6G007650 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | LJ6G007460 LJ6G007650 | 2 | ||
Malus domestica | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD03G007160 MD11G008130 | 2 | |
Manihot esculenta | Orthologous gene family | many-to-1 | ME06278G00070 | 1 | |
Tree-based ortholog | many-to-1 | ME06278G00070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06278G00070 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT3G056580 | 1 | |
Tree-based ortholog | many-to-1 | MT3G056580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G056580 | 1 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G01304 | 1 | |
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00030G01340 PP00150G00670 PP00021G00830 | 3 | |
Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT08G07160 PT10G18590 | 2 | |
Prunus persica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G33280 | 1 | |
Ricinus communis | Orthologous gene family | many-to-1 | RC29337G00110 | 1 | |
Tree-based ortholog | many-to-1 | RC29337G00110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29337G00110 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL12G015650 | 1 | |
Tree-based ortholog | many-to-1 | SL12G015650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL12G015650 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST12G013360 | 1 | |
Tree-based ortholog | many-to-1 | ST12G013360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST12G013360 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP3G18200 | 1 | |
Tree-based ortholog | many-to-1 | TP3G18200 | 1 | ||
Anchor point | 1-to-1 | TP3G18200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G18200 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0007G02090 | 1 | |
Tree-based ortholog | many-to-many | TC0007G01940 TC0007G01970 TC0007G02050 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0007G02090 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV19G11580 VV19G11590 | 2 | |
Tree-based ortholog | many-to-many | VV19G11580 VV19G11590 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV19G11590 VV19G11580 | 2 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G24930 | 1 |