Integrative Orthology Viewer: BR03G28210 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR03G28210 BR03G47110 BR04G00930 ... | 7 | |
Tree-based ortholog | BR03G28210 | 1 | ||
Anchor point | BR05G05400 BR10G06290 BR09G54850 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | BR03G28210 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00009G01820 ATR_00029G03570 | 2 | |
Tree-based ortholog | 1-to-many | ATR_00029G03570 ATR_00009G01820 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00029G03570 ATR_00009G01820 | 2 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G00660 AL4G33950 AL5G32130 ... | 5 | |
Tree-based ortholog | 1-to-1 | AL6G41210 | 1 | ||
Anchor point | many-to-many | AL4G33950 AL1G00660 AL6G41210 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G41210 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G01620 AT3G61430 AT4G00430 ... | 4 | |
Tree-based ortholog | 1-to-1 | AT4G00430 | 1 | ||
Anchor point | many-to-many | AT1G01620 AT4G00430 AT2G45960 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G00430 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV1G06500 BV2G04630 | 2 | |
Tree-based ortholog | 1-to-1 | BV1G06490 | 1 | ||
Anchor point | many-to-1 | BV1G06490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV1G06500 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G00550 CRU_004G27630 CRU_005G26690 ... | 5 | |
Tree-based ortholog | 1-to-1 | CRU_006G35590 | 1 | ||
Anchor point | many-to-many | CRU_004G27630 CRU_006G35590 CRU_001G00550 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G35590 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00011G00150 CP00019G02000 CP00074G00050 ... | 4 | |
Tree-based ortholog | 1-to-1 | CP00074G00050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00074G00050 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR12G15220 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G15220 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL01G02410 CL07G03990 CL07G04000 ... | 4 | |
Tree-based ortholog | 1-to-many | CL07G04000 CL07G04010 CL07G03990 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G02410 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00009G01070 CS00021G00910 CS00145G00190 | 3 | |
Tree-based ortholog | 1-to-1 | CS00021G00920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00009G01070 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00005G06580 CM00075G00370 | 2 | |
Tree-based ortholog | 1-to-many | CM00075G00370 CM35754G00010 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00005G06580 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0004G14810 EG0005G05460 EG0007G24140 | 3 | |
Tree-based ortholog | 1-to-1 | EG0010G02090 | 1 | ||
Anchor point | many-to-1 | EG0005G05460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0004G14810 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV5G03000 FV7G07910 FV7G29030 | 3 | |
Tree-based ortholog | 1-to-many | FV5G03000 FV7G07910 | 2 | ||
Anchor point | many-to-1 | FV7G07910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G07910 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM05G37730 GM08G01860 GM11G35030 ... | 4 | |
Tree-based ortholog | 1-to-many | GM14G06680 GM02G42220 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM05G37730 GM08G01860 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR03G15810 GR04G21280 GR06G18130 ... | 10 | |
Tree-based ortholog | 1-to-many | GR03G15810 GR04G21280 GR13G01930 ... | 7 | ||
Anchor point | many-to-many | GR01G16900 GR07G10000 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G10000 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ2G036090 LJ4G046000 | 2 | |
Tree-based ortholog | 1-to-many | LJ4G046000 LJ2G036090 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G036090 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD14G016870 | 1 | |
Tree-based ortholog | 1-to-many | MD15G019540 MD05G018870 | 2 | ||
Anchor point | many-to-many | MD15G029390 MD01G005130 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD14G016870 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME08265G03010 ME12439G00090 | 2 | |
Tree-based ortholog | 1-to-1 | ME08159G00010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME08265G03010 ME12439G00090 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT3G070210 MT4G415300 MT5G010150 ... | 5 | |
Tree-based ortholog | 1-to-many | MT3G070210 MT5G082070 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G415300 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G44630 OS02G57720 OS04G47220 | 3 | |
Tree-based ortholog | 1-to-many | OS02G57720 OS02G44630 OS04G47220 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G47220 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL12G00450 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL12G00450 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00001G02500 PP00102G00520 PP00305G00060 | 3 | |
Tree-based ortholog | 1-to-many | PP00001G02500 PP00102G00520 PP00305G00060 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00102G00520 PP00001G02500 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT03G12860 PT06G09810 PT08G06560 ... | 5 | |
Tree-based ortholog | 1-to-many | PT03G12860 PT10G19190 PT08G06560 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT16G11330 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_002G16660 PPE_002G23760 PPE_005G11040 | 3 | |
Tree-based ortholog | 1-to-many | PPE_005G11040 PPE_002G16660 PPE_002G23760 | 3 | ||
Anchor point | many-to-1 | PPE_002G16660 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PPE_002G16660 PPE_005G11040 | 2 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29669G00170 RC29669G00180 RC29969G00060 ... | 5 | |
Tree-based ortholog | 1-to-many | RC30190G03970 RC29669G00170 RC29669G00180 ... | 4 | ||
Anchor point | many-to-1 | RC30174G02950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30174G02950 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G094690 SL03G096290 SL08G008050 ... | 5 | |
Tree-based ortholog | 1-to-many | SL12G056220 SL08G008050 SL08G081190 | 3 | ||
Anchor point | many-to-1 | SL01G094690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | SL08G008050 SL12G056220 | 2 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G032080 ST06G009110 ST08G029250 ... | 4 | |
Tree-based ortholog | 1-to-many | ST12G024040 ST08G009820 ST08G029250 | 3 | ||
Anchor point | many-to-1 | ST01G032080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST12G024040 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G00700 TP4G28030 TP5G01970 ... | 5 | |
Tree-based ortholog | 1-to-1 | TP6G00460 | 1 | ||
Anchor point | many-to-many | TP4G28030 TP6G00460 TP1G00700 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G00460 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G35520 TC0003G27620 TC0010G02230 | 3 | |
Tree-based ortholog | 1-to-many | TC0003G27620 TC0010G02230 | 2 | ||
Anchor point | many-to-1 | TC0001G35520 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G35520 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV02G06360 VV13G10790 | 2 | |
Tree-based ortholog | 1-to-many | VV15G05070 VV02G06360 VV13G10790 | 3 | ||
Anchor point | many-to-1 | VV15G05080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G10790 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM02G07250 ZM04G20750 ZM04G24720 ... | 4 | |
Tree-based ortholog | 1-to-many | ZM04G24720 ZM02G07250 ZM05G35920 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G35920 | 1 |