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Integrative Orthology Viewer:
BR03G23210
(Brassica rapa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Brassica rapa | Orthologous gene family | BR03G23210 BR10G00830 | 2 |  |
| Tree-based ortholog | BR10G23960 BR03G02070 BR03G23210 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | BR03G23210 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00029G03670 | 1 | |
| Tree-based ortholog | many-to-many | ATR_00029G03760 ATR_00029G03670 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00029G03780 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL1G06860 | 1 | |
| Tree-based ortholog | many-to-1 | AL6G05340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G14250 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G07270 AT2G29680 | 2 | |
| Tree-based ortholog | many-to-1 | AT5G05730 | 1 | ||
| Anchor point | N/A | AT2G29680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G29690 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV7G05230 | 1 | |
| Tree-based ortholog | many-to-many | BV7G05210 BV2G04110 BV7G05230 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G05210 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G06190 CRU_004G10490 | 2 | |
| Tree-based ortholog | many-to-many | CRU_006G04490 CRU_006G04520 | 2 | ||
| Anchor point | N/A | CRU_004G10490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G10490 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00112G00410 | 1 | |
| Tree-based ortholog | many-to-1 | CP00112G00390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00112G00390 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | many-to-1 | CR06G14820 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G14820 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL02G19900 | 1 | |
| Tree-based ortholog | many-to-many | CL04G00660 CL11G01050 CL02G19900 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G01130 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00026G00940 | 1 | |
| Tree-based ortholog | many-to-many | CS00021G00800 CS00026G00940 CS00021G00790 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00021G00790 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00084G00210 | 1 | |
| Tree-based ortholog | many-to-many | CM00008G02350 CM00084G00210 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00010G02420 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0002G18000 | 1 | |
| Tree-based ortholog | many-to-many | EG0010G02060 EG0002G18000 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G17990 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV3G22150 | 1 | |
| Tree-based ortholog | many-to-1 | FV7G29150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G22150 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM08G45230 GM18G07444 | 2 | |
| Tree-based ortholog | many-to-1 | GM18G03256 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM20G23680 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR03G12350 | 1 | |
| Tree-based ortholog | many-to-1 | GR09G32220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR01G11550 | 1 | ||
| Lotus japonicus | Tree-based ortholog | many-to-1 | LJ5G040360 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G040360 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G198630 MD00G434870 MD00G434880 ... | 5 | |
| Tree-based ortholog | many-to-many | MD00G207840 MD14G017050 MD11G006420 ... | 19 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G170730 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME03150G00350 | 1 | |
| Tree-based ortholog | many-to-1 | ME08265G03110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03150G00330 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT3G463490 | 1 | |
| Tree-based ortholog | many-to-1 | MT1G114520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT3G467000 MT3G076770 MT3G070290 | 3 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS01G63710 | 1 | |
| Tree-based ortholog | many-to-many | OS03G15780 OS01G04900 OS01G63710 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G15780 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL04G01040 | 1 | |
| Tree-based ortholog | many-to-1 | OL07G01130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL07G01130 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-1 | PP00030G00600 | 1 | |
| Tree-based ortholog | many-to-many | PP00154G00470 PP00154G00780 PP00077G00900 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00077G00900 PP00154G00780 PP00154G00470 | 3 | ||
| Populus trichocarpa | Orthologous gene family | many-to-1 | PT01G25020 | 1 | |
| Tree-based ortholog | many-to-many | PT10G19060 PT08G06660 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT09G04430 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_006G00440 | 1 | |
| Tree-based ortholog | many-to-many | PPE_002G23840 PPE_002G23830 PPE_006G00440 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G23840 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29681G00270 | 1 | |
| Tree-based ortholog | many-to-1 | RC29669G00390 | 1 | ||
| Anchor point | N/A | RC29681G00270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29681G00290 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL06G076860 | 1 | |
| Tree-based ortholog | many-to-many | SL06G019200 SL06G076860 SL06G005980 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G006100 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST06G032620 | 1 | |
| Tree-based ortholog | many-to-many | ST06G032620 ST06G005900 ST06G005920 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G006020 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP4G12400 | 1 | |
| Tree-based ortholog | many-to-1 | TP6G37170 | 1 | ||
| Anchor point | N/A | TP4G12400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G12410 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0009G29910 | 1 | |
| Tree-based ortholog | many-to-many | TC0010G02140 TC0010G02150 TC0009G29910 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G29890 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV06G02060 | 1 | |
| Tree-based ortholog | many-to-1 | VV13G10700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G02040 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM03G26500 ZM08G31290 | 2 | |
| Tree-based ortholog | many-to-many | ZM01G58430 ZM03G26500 ZM01G10660 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G10660 | 1 |