Integrative Orthology Viewer: BR03G22080 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR03G22080 | 1 | |
Tree-based ortholog | BR05G04490 BR03G22080 | 2 | ||
Anchor point | BR08G10740 BR05G04490 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | BR03G22080 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00002G01370 | 1 | |
Tree-based ortholog | many-to-many | ATR_00002G01370 ATR_00008G02360 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00002G01370 ATR_00008G02360 | 2 | ||
Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL4G32510 | 1 | |
Tree-based ortholog | many-to-1 | AL4G32510 | 1 | ||
Anchor point | many-to-1 | AL4G32510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G32510 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT2G44730 | 1 | |
Tree-based ortholog | many-to-1 | AT2G44730 | 1 | ||
Anchor point | many-to-many | AT4G17060 AT2G44730 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G44730 | 1 | ||
Beta vulgaris | Orthologous gene family | 1-to-1 | BV9G14160 | 1 | |
Tree-based ortholog | many-to-many | BV5G22650 BV7G14790 BV9G14160 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV9G14160 | 1 | ||
Capsella rubella | Orthologous gene family | 1-to-1 | CRU_004G26310 | 1 | |
Tree-based ortholog | many-to-1 | CRU_004G26310 | 1 | ||
Anchor point | many-to-many | CRU_004G26310 CRU_007G23290 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G26310 | 1 | ||
Carica papaya | Orthologous gene family | 1-to-1 | CP00041G00720 | 1 | |
Tree-based ortholog | many-to-1 | CP00041G00720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00041G00720 | 1 | ||
Citrullus lanatus | Orthologous gene family | 1-to-1 | CL05G03380 | 1 | |
Tree-based ortholog | many-to-1 | CL05G03380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G03380 | 1 | ||
Citrus sinensis | Orthologous gene family | 1-to-1 | CS00001G00510 | 1 | |
Tree-based ortholog | many-to-1 | CS00001G00510 | 1 | ||
Anchor point | many-to-1 | CS00001G00510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00001G00510 | 1 | ||
Cucumis melo | Orthologous gene family | 1-to-1 | CM00006G03810 | 1 | |
Tree-based ortholog | many-to-1 | CM00006G03810 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00006G03810 | 1 | ||
Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0005G13540 | 1 | |
Tree-based ortholog | many-to-1 | EG0005G13540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0005G13540 | 1 | ||
Fragaria vesca | Orthologous gene family | 1-to-1 | FV7G20510 | 1 | |
Tree-based ortholog | many-to-1 | FV7G20510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G20510 | 1 | ||
Glycine max | Orthologous gene family | 1-to-1 | GM08G05630 | 1 | |
Tree-based ortholog | many-to-many | GM08G05630 GM18G48343 GM09G38050 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM08G05630 | 1 | ||
Gossypium raimondii | Orthologous gene family | 1-to-1 | GR04G16710 | 1 | |
Tree-based ortholog | many-to-1 | GR04G16710 | 1 | ||
Anchor point | many-to-1 | GR04G16710 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G16710 | 1 | ||
Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G036020 | 1 | |
Malus domestica | Orthologous gene family | 1-to-many | MD02G020030 MD02G020200 | 2 | |
Tree-based ortholog | many-to-many | MD02G020200 MD02G020030 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD02G020030 MD02G020200 | 2 | ||
Manihot esculenta | Orthologous gene family | 1-to-1 | ME08265G04190 | 1 | |
Tree-based ortholog | many-to-1 | ME08265G04190 | 1 | ||
Anchor point | many-to-1 | ME08265G04190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08265G04190 | 1 | ||
Medicago truncatula | Orthologous gene family | 1-to-many | MT4G117990 MT7G081190 | 2 | |
Tree-based ortholog | many-to-many | MT4G117990 MT7G081190 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G117990 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | many-to-many | OS04G45940 OS10G41460 OS08G37810 | 3 | |
Anchor point | many-to-1 | OS04G45940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS10G41460 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00065G01130 | 1 | |
Populus trichocarpa | Orthologous gene family | 1-to-many | PT02G13950 PT14G05120 | 2 | |
Tree-based ortholog | many-to-many | PT14G05120 PT02G13950 | 2 | ||
Anchor point | many-to-many | PT02G13950 PT14G05120 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT02G13950 PT14G05120 | 2 | ||
Prunus persica | Orthologous gene family | 1-to-1 | PPE_002G12530 | 1 | |
Tree-based ortholog | many-to-1 | PPE_002G12530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G05830 | 1 | ||
Ricinus communis | Orthologous gene family | 1-to-1 | RC29709G00150 | 1 | |
Tree-based ortholog | many-to-1 | RC29709G00150 | 1 | ||
Anchor point | many-to-1 | RC29709G00150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29709G00150 | 1 | ||
Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL01G088820 | 1 | |
Tree-based ortholog | many-to-1 | SL01G088820 | 1 | ||
Anchor point | many-to-1 | SL01G088820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G088820 | 1 | ||
Solanum tuberosum | Orthologous gene family | 1-to-1 | ST01G028970 | 1 | |
Tree-based ortholog | many-to-1 | ST01G028970 | 1 | ||
Anchor point | many-to-1 | ST01G028970 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G028970 | 1 | ||
Thellungiella parvula | Orthologous gene family | 1-to-1 | TP4G26780 | 1 | |
Tree-based ortholog | many-to-1 | TP4G26780 | 1 | ||
Anchor point | many-to-1 | TP4G26780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G26780 | 1 | ||
Theobroma cacao | Orthologous gene family | 1-to-1 | TC0001G39530 | 1 | |
Tree-based ortholog | many-to-1 | TC0001G39530 | 1 | ||
Anchor point | many-to-1 | TC0001G39530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G39530 | 1 | ||
Vitis vinifera | Orthologous gene family | 1-to-1 | VV00G07250 | 1 | |
Tree-based ortholog | many-to-many | VV00G07250 VV07G13160 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV00G07250 | 1 | ||
Zea mays | Tree-based ortholog | many-to-many | ZM10G21280 ZM02G08080 ZM01G21640 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM01G21640 ZM09G17860 | 2 |