Integrative Orthology Viewer: BR03G04660 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR03G04660 BR10G21940 | 2 | |
Tree-based ortholog | BR03G04660 | 1 | ||
Anchor point | BR10G21940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | BR03G04660 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00025G00110 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00025G00110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00025G00110 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL6G11770 | 1 | |
Tree-based ortholog | 1-to-1 | AL6G11770 | 1 | ||
Anchor point | 1-to-1 | AL6G11770 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G11770 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT5G11900 | 1 | |
Tree-based ortholog | 1-to-1 | AT5G11900 | 1 | ||
Anchor point | 1-to-1 | AT5G11900 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G11900 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_006G10150 | 1 | |
Tree-based ortholog | 1-to-1 | CRU_006G10150 | 1 | ||
Anchor point | 1-to-1 | CRU_006G10150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G10150 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00007G01770 | 1 | |
Tree-based ortholog | 1-to-1 | CP00007G01770 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00007G01770 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR07G09720 | 1 | |
Tree-based ortholog | 1-to-1 | CR07G09720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR07G09720 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL03G15180 | 1 | |
Tree-based ortholog | 1-to-1 | CL03G15180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G15180 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00005G02140 CS00240G00020 | 2 | |
Tree-based ortholog | 1-to-1 | CS00240G00020 | 1 | ||
Anchor point | 1-to-1 | CS00005G02140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00005G02140 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM32264G00010 | 1 | |
Tree-based ortholog | 1-to-1 | CM32264G00010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM32264G00010 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0003G05290 | 1 | |
Tree-based ortholog | 1-to-1 | EG0003G05290 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0003G05290 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV1G09060 | 1 | |
Tree-based ortholog | 1-to-1 | FV1G09060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G09060 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM09G07170 GM15G18500 | 2 | |
Tree-based ortholog | 1-to-many | GM15G18500 GM09G07170 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM15G18500 GM09G07170 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G01220 GR10G09980 | 2 | |
Tree-based ortholog | 1-to-1 | GR01G01220 | 1 | ||
Anchor point | 1-to-1 | GR10G09980 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR10G09980 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ6G016990 | 1 | |
Tree-based ortholog | 1-to-1 | LJ6G016990 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G016990 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G305830 MD00G377960 MD00G453570 | 3 | |
Tree-based ortholog | 1-to-many | MD17G000250 MD00G377960 MD00G305830 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G453570 MD00G377960 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME04803G00030 ME10493G01000 | 2 | |
Tree-based ortholog | 1-to-many | ME04803G00030 ME10493G01000 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME04803G00030 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT7G023540 | 1 | |
Tree-based ortholog | 1-to-1 | MT7G023540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G023540 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS01G09890 | 1 | |
Tree-based ortholog | 1-to-1 | OS01G09890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G09890 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL11G01820 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL11G01820 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00070G01010 PP00141G00200 | 2 | |
Tree-based ortholog | 1-to-many | PP00070G01010 PP00141G00200 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00141G00200 PP00070G01010 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT06G22810 PT18G05290 | 2 | |
Tree-based ortholog | 1-to-many | PT18G05290 PT06G22810 | 2 | ||
Anchor point | 1-to-1 | PT06G22810 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT06G22810 PT18G05290 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_007G22870 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_007G22870 | 1 | ||
Anchor point | 1-to-1 | PPE_007G22870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G22870 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29912G00580 | 1 | |
Tree-based ortholog | 1-to-1 | RC29912G00580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29912G00580 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL07G039450 SL12G008910 | 2 | |
Tree-based ortholog | 1-to-many | SL12G008910 SL07G039450 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G039450 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST12G010090 | 1 | |
Tree-based ortholog | 1-to-many | ST12G010090 ST07G011510 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST12G010090 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP6G31700 | 1 | |
Tree-based ortholog | 1-to-1 | TP6G31700 | 1 | ||
Anchor point | 1-to-1 | TP6G31700 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G31700 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0009G05180 TC0009G08380 | 2 | |
Tree-based ortholog | 1-to-many | TC0009G08380 TC0008G13600 | 2 | ||
Anchor point | 1-to-1 | TC0009G05180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G05180 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV04G08290 VV11G03520 | 2 | |
Tree-based ortholog | 1-to-1 | VV11G03520 | 1 | ||
Anchor point | 1-to-1 | VV04G08290 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV11G03520 VV04G08290 | 2 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM08G05210 | 1 | |
Tree-based ortholog | 1-to-many | ZM08G05210 ZM03G01980 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G05210 | 1 |