Integrative Orthology Viewer: BR02G35440 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR02G35440 | 1 | |
Tree-based ortholog | BR09G04900 BR02G35440 | 2 | ||
Anchor point | BR09G04900 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | BR09G04900 BR02G35440 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | many-to-many | ATR_00003G00490 ATR_00003G00430 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00003G00430 | 1 | ||
Arabidopsis lyrata | Tree-based ortholog | many-to-1 | AL8G13140 | 1 | |
Anchor point | 1-to-1 | AL3G06870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL8G13140 | 1 | ||
Arabidopsis thaliana | Tree-based ortholog | many-to-1 | AT5G49460 | 1 | |
Anchor point | 1-to-many | AT3G06650 AT5G49460 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G49460 | 1 | ||
Beta vulgaris | Tree-based ortholog | many-to-many | BV3G04190 BV3G04200 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV3G04200 | 1 | ||
Capsella rubella | Tree-based ortholog | many-to-1 | CRU_008G09150 | 1 | |
Anchor point | 1-to-many | CRU_003G05870 CRU_008G09150 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_008G09150 | 1 | ||
Carica papaya | Tree-based ortholog | many-to-1 | CP00009G00530 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00009G00530 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | many-to-1 | CR02G03520 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR02G03520 | 1 | ||
Citrullus lanatus | Tree-based ortholog | many-to-many | CL06G04360 CL06G04310 CL08G09620 | 3 | |
Anchor point | 1-to-1 | CL06G04310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL08G09620 | 1 | ||
Citrus sinensis | Tree-based ortholog | many-to-1 | CS00016G01380 | 1 | |
Anchor point | 1-to-1 | CS00016G01380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00016G01380 | 1 | ||
Cucumis melo | Tree-based ortholog | many-to-many | CM00047G01440 CM00047G01410 CM00014G08600 | 3 | |
Anchor point | 1-to-1 | CM00047G01410 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00047G01410 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | many-to-many | EG0008G32670 EG0009G00460 EG0001G02330 ... | 4 | |
Anchor point | 1-to-1 | EG0008G32670 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | EG0008G32670 EG0009G00460 | 2 | ||
Fragaria vesca | Tree-based ortholog | many-to-1 | FV3G39330 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV3G39330 | 1 | ||
Glycine max | Tree-based ortholog | many-to-many | GM09G04010 GM07G36840 GM17G03700 ... | 6 | |
Anchor point | 1-to-many | GM17G03700 GM07G36840 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM09G04000 GM15G15020 | 2 | ||
Gossypium raimondii | Tree-based ortholog | many-to-many | GR02G03010 GR11G20010 GR02G03020 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR11G20010 | 1 | ||
Lotus japonicus | Tree-based ortholog | many-to-1 | LJ6G023830 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ6G023830 | 1 | ||
Malus domestica | Tree-based ortholog | many-to-many | MD13G014000 MD00G159380 MD16G009650 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD13G014000 | 1 | ||
Manihot esculenta | Tree-based ortholog | many-to-many | ME00708G00470 ME01551G04410 ME01551G04400 | 3 | |
Anchor point | 1-to-1 | ME01551G04400 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME00708G00470 ME01551G04410 | 2 | ||
Medicago truncatula | Tree-based ortholog | many-to-many | MT2G034140 MT2G034090 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT2G034090 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | many-to-1 | OS05G06510 | 1 | |
Anchor point | 1-to-1 | OS05G06510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G19450 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL03G05860 | 1 | |
Physcomitrella patens | Tree-based ortholog | many-to-1 | PP00126G00360 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00046G00230 PP00035G02030 | 2 | ||
Populus trichocarpa | Tree-based ortholog | many-to-many | PT10G14580 PT08G10530 PT10G14570 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT08G10530 | 1 | ||
Prunus persica | Tree-based ortholog | many-to-many | PPE_001G11070 PPE_001G11090 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_001G11070 | 1 | ||
Ricinus communis | Tree-based ortholog | many-to-many | RC29889G00650 RC29889G00640 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29889G00650 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | many-to-many | SL01G059880 SL12G099260 SL12G099270 | 3 | |
Anchor point | 1-to-1 | SL12G099260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G059880 | 1 | ||
Solanum tuberosum | Tree-based ortholog | many-to-many | ST01G018060 ST12G031220 ST05G026090 ... | 4 | |
Anchor point | 1-to-1 | ST12G031220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST01G018060 | 1 | ||
Thellungiella parvula | Tree-based ortholog | many-to-1 | TP2G19780 | 1 | |
Anchor point | 1-to-many | TP2G19780 TP3G05560 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP2G19780 | 1 | ||
Theobroma cacao | Tree-based ortholog | many-to-many | TC0001G31420 TC0004G30100 TC0004G30130 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0004G30130 | 1 | ||
Vitis vinifera | Tree-based ortholog | many-to-1 | VV05G11550 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV05G11550 | 1 | ||
Zea mays | Tree-based ortholog | many-to-1 | ZM08G21970 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM08G07440 | 1 |