Integrative Orthology Viewer: BR02G27770 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR01G10610 BR02G27770 BR06G37690 | 3 | |
Tree-based ortholog | BR06G37690 BR02G27770 | 2 | ||
Anchor point | BR06G37690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | BR02G27770 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00032G00720 | 1 | |
Tree-based ortholog | many-to-many | ATR_00036G00450 ATR_00032G00720 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00032G00720 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL7G22860 AL8G03930 | 2 | |
Tree-based ortholog | many-to-1 | AL8G03930 | 1 | ||
Anchor point | 1-to-1 | AL7G22860 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G03930 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT4G19660 AT5G45110 | 2 | |
Tree-based ortholog | many-to-1 | AT5G45110 | 1 | ||
Anchor point | 1-to-1 | AT4G19660 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G45110 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV0G78270 | 1 | |
Tree-based ortholog | many-to-1 | BV0G78270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G78270 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_007G20540 CRU_008G02980 | 2 | |
Tree-based ortholog | many-to-1 | CRU_008G02980 | 1 | ||
Anchor point | 1-to-1 | CRU_007G20540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G02980 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00050G01190 CP00135G00430 | 2 | |
Tree-based ortholog | many-to-many | CP00061G00030 CP00050G01190 CP00135G00430 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00135G00430 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL01G15700 CL07G15370 | 2 | |
Tree-based ortholog | many-to-many | CL07G15370 CL01G15700 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G15700 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00008G02560 CS00415G00010 CS00942G00020 ... | 8 | |
Tree-based ortholog | many-to-many | CS04525G00010 CS00942G00030 CS01918G00020 ... | 11 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00008G02560 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00027G01290 CM00049G01370 | 2 | |
Tree-based ortholog | many-to-many | CM00027G01290 CM00049G01370 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00049G01370 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G16890 EG0005G15530 | 2 | |
Tree-based ortholog | many-to-many | EG0001G16890 EG0008G31420 EG0005G15530 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0005G15530 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV3G10340 FV6G35420 FV6G35440 | 3 | |
Tree-based ortholog | many-to-many | FV6G35440 FV6G35420 FV3G10340 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G10340 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM02G45260 GM09G02430 GM14G03510 ... | 4 | |
Tree-based ortholog | many-to-many | GM02G45260 GM14G03510 GM15G13320 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM15G13320 GM09G02430 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR06G00900 GR06G09190 GR11G05020 | 3 | |
Tree-based ortholog | many-to-many | GR06G00900 GR11G05020 GR06G09190 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G09190 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ6G020420 | 1 | |
Tree-based ortholog | many-to-1 | LJ6G020420 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G020420 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G038730 MD00G284710 MD05G008450 ... | 6 | |
Tree-based ortholog | many-to-many | MD00G099510 MD00G195860 MD00G135460 ... | 10 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD10G019410 MD00G038730 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME06299G00010 ME10493G00910 ME12242G00010 | 3 | |
Tree-based ortholog | many-to-many | ME12242G00010 ME06299G00010 ME06299G00020 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME12242G00010 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT2G028950 MT5G090770 | 2 | |
Tree-based ortholog | many-to-many | MT5G090770 MT2G028950 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G028950 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G56200 OS03G46440 | 2 | |
Tree-based ortholog | many-to-1 | OS01G56200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G56200 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00234G00220 PP00518G00020 | 2 | |
Tree-based ortholog | many-to-many | PP00234G00220 PP00518G00020 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00234G00220 PP00518G00020 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT02G05650 PT05G20610 PT12G11830 ... | 5 | |
Tree-based ortholog | many-to-many | PT05G20610 PT02G05650 PT15G11690 ... | 8 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT12G11850 PT15G11720 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_003G16080 PPE_004G10500 PPE_004G10530 | 3 | |
Tree-based ortholog | many-to-many | PPE_003G16080 PPE_004G10530 PPE_004G10500 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G10500 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29975G00040 | 1 | |
Tree-based ortholog | many-to-1 | RC29975G00040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29975G00040 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G069310 SL07G044980 | 2 | |
Tree-based ortholog | many-to-many | SL07G044980 SL02G069310 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G069310 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST02G015550 ST07G016890 | 2 | |
Tree-based ortholog | many-to-many | ST07G016890 ST02G015550 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G015550 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP2G09920 TP7G18230 | 2 | |
Tree-based ortholog | many-to-1 | TP2G09920 | 1 | ||
Anchor point | 1-to-1 | TP7G18230 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G09920 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G16230 TC0006G13590 TC0009G08220 | 3 | |
Tree-based ortholog | many-to-many | TC0001G16230 TC0006G13590 TC0002G17120 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0006G13590 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV10G07140 VV11G03390 | 2 | |
Tree-based ortholog | many-to-1 | VV10G07140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV10G07140 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G60340 ZM08G34170 | 2 | |
Tree-based ortholog | many-to-1 | ZM08G34170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G34170 | 1 |