Integrative Orthology Viewer: BR02G26390 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR02G26390 BR10G06370 | 2 | |
Tree-based ortholog | BR02G26390 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | BR02G26390 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00009G02410 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00009G02410 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00009G02410 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G00580 AL6G41120 | 2 | |
Tree-based ortholog | 1-to-1 | AL6G41120 | 1 | ||
Anchor point | N/A | AL6G41120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G41120 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G01710 AT4G00520 | 2 | |
Tree-based ortholog | 1-to-1 | AT4G00520 | 1 | ||
Anchor point | N/A | AT4G00520 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G00520 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV1G06750 BV1G06760 BV1G06770 | 3 | |
Tree-based ortholog | 1-to-many | BV1G06750 BV1G06760 BV1G06770 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BV1G06760 BV1G06770 | 2 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G00440 CRU_006G35510 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_006G35510 | 1 | ||
Anchor point | N/A | CRU_006G35510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G35510 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00018G02440 | 1 | |
Tree-based ortholog | 1-to-1 | CP00018G02440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00018G02440 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G01830 | 1 | |
Tree-based ortholog | 1-to-1 | CL05G01830 | 1 | ||
Anchor point | N/A | CL05G01830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G01830 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00001G03020 | 1 | |
Tree-based ortholog | 1-to-1 | CS00001G03020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00001G03020 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00006G01950 | 1 | |
Tree-based ortholog | 1-to-1 | CM00006G01950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00006G01950 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0005G01320 | 1 | |
Tree-based ortholog | 1-to-1 | EG0005G01320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0005G01320 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV7G08170 | 1 | |
Tree-based ortholog | 1-to-1 | FV7G08180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G08170 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM03G01210 GM07G07771 GM09G39612 ... | 4 | |
Tree-based ortholog | 1-to-many | GM03G01210 GM07G07771 GM09G39612 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM18G46620 GM09G39612 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR07G09900 | 1 | |
Tree-based ortholog | 1-to-1 | GR07G09900 | 1 | ||
Anchor point | N/A | GR07G09900 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G09900 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G048980 MD00G405030 MD00G405060 | 3 | |
Tree-based ortholog | 1-to-many | MD00G125200 MD00G048980 MD00G405060 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G405030 MD00G405060 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME02658G01330 ME03581G01860 | 2 | |
Tree-based ortholog | 1-to-many | ME03581G01860 ME02658G01330 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03581G01860 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT7G077400 MT8G030920 | 2 | |
Tree-based ortholog | 1-to-many | MT8G030920 MT7G077400 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G077400 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS04G47120 | 1 | |
Tree-based ortholog | 1-to-1 | OS04G47120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G47120 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00079G01440 | 1 | |
Tree-based ortholog | 1-to-many | PP00067G00240 PP00079G01440 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00079G01440 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-1 | PT14G08330 | 1 | |
Tree-based ortholog | 1-to-1 | PT14G08330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT14G08330 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_002G16510 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_002G16510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G16510 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30174G02740 | 1 | |
Tree-based ortholog | 1-to-1 | RC30174G02740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30174G02740 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G094530 SL01G094550 | 2 | |
Tree-based ortholog | 1-to-many | SL01G094550 SL01G094530 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G094530 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G031890 ST01G031910 | 2 | |
Tree-based ortholog | 1-to-many | ST01G031910 ST01G031890 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G031890 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G00600 TP6G00550 | 2 | |
Tree-based ortholog | 1-to-1 | TP6G00550 | 1 | ||
Anchor point | N/A | TP6G00550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G00550 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0001G35690 | 1 | |
Tree-based ortholog | 1-to-1 | TC0001G35690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G35690 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV15G04800 | 1 | |
Tree-based ortholog | 1-to-1 | VV15G04800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV15G04800 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM10G22540 | 1 | |
Tree-based ortholog | 1-to-1 | ZM10G22540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM10G22540 | 1 |