Integrative Orthology Viewer: BR02G24160 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR00G13490 BR02G07890 BR02G17720 ... | 12 | |
Tree-based ortholog | BR02G24160 | 1 | ||
Anchor point | BR06G15680 BR07G32330 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | BR02G24160 BR07G32330 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00044G00080 ATR_00047G00640 ATR_00057G00250 ... | 4 | |
Tree-based ortholog | 1-to-1 | ATR_00090G01060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00090G01060 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G21680 AL1G22770 AL2G13010 ... | 8 | |
Tree-based ortholog | 1-to-1 | AL2G26190 | 1 | ||
Anchor point | many-to-many | AL1G22770 AL2G26190 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL2G26190 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G20560 AT1G21530 AT1G21540 ... | 14 | |
Tree-based ortholog | 1-to-1 | AT1G77240 | 1 | ||
Anchor point | many-to-many | AT1G21530 AT1G77240 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G77240 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV0G00560 BV0G05130 BV0G05190 ... | 10 | |
Tree-based ortholog | 1-to-many | BV7G17330 BV0G00560 BV7G17340 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV7G17340 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G19220 CRU_001G20120 CRU_002G10970 ... | 15 | |
Tree-based ortholog | 1-to-1 | CRU_002G22760 | 1 | ||
Anchor point | many-to-many | CRU_002G22760 CRU_001G20120 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_002G22760 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00010G01790 CP00064G01520 CP00108G00150 ... | 5 | |
Tree-based ortholog | 1-to-1 | CP00064G01520 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00064G01520 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR03G15830 | 1 | |
Tree-based ortholog | 1-to-1 | CR03G15830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR03G15830 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL01G14930 CL01G14940 CL01G15020 ... | 7 | |
Tree-based ortholog | 1-to-many | CL01G14930 CL01G14940 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL01G14940 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00004G00020 CS00004G00030 CS00004G00300 ... | 10 | |
Tree-based ortholog | 1-to-many | CS00004G00040 CS00004G00300 | 2 | ||
Anchor point | many-to-1 | CS00004G00020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00036G01030 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00006G08100 CM00007G10030 CM00029G04000 ... | 7 | |
Tree-based ortholog | 1-to-many | CM00074G00720 CM00074G00710 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00074G00720 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G01510 EG0001G01550 EG0001G01560 ... | 14 | |
Tree-based ortholog | 1-to-many | EG0006G24410 EG0006G24420 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | EG0006G24410 EG0006G24420 | 2 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G60550 FV1G12380 FV1G27760 ... | 7 | |
Tree-based ortholog | 1-to-many | FV0G60550 FV1G27760 | 2 | ||
Anchor point | many-to-1 | FV2G30520 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV1G27760 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G44240 GM01G44250 GM02G04790 ... | 19 | |
Tree-based ortholog | 1-to-many | GM02G40610 GM14G38910 GM14G38920 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM14G38920 GM02G40620 GM02G40640 | 3 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR03G00330 GR03G00370 GR04G04810 ... | 12 | |
Tree-based ortholog | 1-to-1 | GR13G10870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR13G10870 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ2G036860 LJ2G036950 LJ4G038290 | 3 | |
Tree-based ortholog | 1-to-many | LJ4G038290 LJ6G019290 LJ2G036860 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ2G036950 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G083830 MD00G106460 MD00G247380 ... | 12 | |
Tree-based ortholog | 1-to-many | MD17G021430 MD00G083830 MD00G464800 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD00G464800 MD00G106460 MD09G026310 | 3 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME01551G04200 ME01551G04210 ME06708G00250 ... | 8 | |
Tree-based ortholog | 1-to-many | ME07595G00040 ME07595G00030 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME07595G00040 ME07595G00030 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT00G08120 MT2G044180 MT3G064420 ... | 12 | |
Tree-based ortholog | 1-to-many | MT5G076200 MT00G08120 MT5G076220 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT5G076240 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G24030 OS02G02700 OS03G03790 ... | 9 | |
Tree-based ortholog | 1-to-1 | OS04G57850 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS04G57850 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | 1-to-many | OL01G06260 OL10G01670 OL04G05140 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL02G00160 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00007G01680 PP00220G00210 | 2 | |
Tree-based ortholog | 1-to-many | PP00220G00210 PP00007G01680 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00007G01680 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT00G00870 PT00G00890 PT04G00030 ... | 18 | |
Tree-based ortholog | 1-to-many | PT13G09410 PT13G09620 PT13G09570 ... | 9 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT15G14850 PT04G00030 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G11530 PPE_003G00120 PPE_007G19930 ... | 6 | |
Tree-based ortholog | 1-to-many | PPE_010G01040 PPE_010G01050 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_010G01050 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29636G00120 RC29769G00010 RC29830G00420 ... | 9 | |
Tree-based ortholog | 1-to-many | RC30074G00020 RC29636G00120 RC30206G00250 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30074G00020 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G060180 SL02G037490 SL02G081350 ... | 19 | |
Tree-based ortholog | 1-to-1 | SL03G031940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL03G031940 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G014800 ST02G008160 ST02G008170 ... | 18 | |
Tree-based ortholog | 1-to-1 | ST03G008580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST02G008160 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G18270 TP1G19080 TP3G15150 ... | 9 | |
Tree-based ortholog | 1-to-1 | TP5G32410 | 1 | ||
Anchor point | many-to-many | TP5G32410 TP1G19080 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP5G32410 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G00750 TC0004G06060 TC0004G21150 ... | 6 | |
Tree-based ortholog | 1-to-1 | TC0008G13050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0008G13050 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV04G00150 VV04G06800 VV04G06830 ... | 6 | |
Tree-based ortholog | 1-to-many | VV04G06800 VV04G06830 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV04G06800 VV04G06830 | 2 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G02250 ZM01G02550 ZM01G02560 ... | 9 | |
Tree-based ortholog | 1-to-many | ZM06G17410 ZM02G00630 ZM02G24890 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM02G00630 ZM06G17410 | 2 |