Integrative Orthology Viewer: BR02G04200 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR02G04200 BR10G24220 | 2 | |
Tree-based ortholog | BR10G24160 BR02G04200 | 2 | ||
Anchor point | BR10G24160 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | BR02G04200 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00012G03570 ATR_00053G01060 | 2 | |
Tree-based ortholog | many-to-1 | ATR_00036G01560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00012G03570 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL5G25790 AL6G05590 | 2 | |
Tree-based ortholog | many-to-1 | AL6G05520 | 1 | ||
Anchor point | 1-to-1 | AL6G05520 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G05590 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT3G10160 AT3G55630 AT5G05980 | 3 | |
Tree-based ortholog | many-to-1 | AT5G05920 | 1 | ||
Anchor point | 1-to-1 | AT5G05920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G05980 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV2G05980 BV3G12150 | 2 | |
Tree-based ortholog | many-to-1 | BV6G24570 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G05980 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_003G08920 CRU_005G21040 CRU_006G04750 | 3 | |
Tree-based ortholog | many-to-1 | CRU_006G04680 | 1 | ||
Anchor point | 1-to-1 | CRU_006G04680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G04750 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00120G00120 CP00776G00010 | 2 | |
Tree-based ortholog | many-to-1 | CP00019G02470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00019G02470 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-many | CR05G04150 CR05G04170 | 2 | |
Tree-based ortholog | many-to-many | CR01G04240 CR08G03330 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR08G03330 CR01G04240 | 2 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL09G19330 CL10G13680 | 2 | |
Tree-based ortholog | many-to-1 | CL01G07550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G19330 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00021G01480 CS00234G00050 | 2 | |
Tree-based ortholog | many-to-1 | CS00069G00290 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00021G01480 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00011G07650 | 1 | |
Tree-based ortholog | many-to-many | CM00076G00680 CM00005G00650 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00005G00650 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G19200 EG0010G18410 | 2 | |
Tree-based ortholog | many-to-1 | EG0003G07620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G18410 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV6G33780 FV7G28310 | 2 | |
Tree-based ortholog | many-to-1 | FV0G36440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G28310 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM02G34760 GM02G41870 GM10G16410 ... | 5 | |
Tree-based ortholog | many-to-1 | GM07G15330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM14G07100 GM02G41870 | 2 | ||
Gossypium raimondii | Tree-based ortholog | many-to-many | GR11G22640 GR11G22630 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR11G22640 GR11G22630 | 2 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ5G015090 | 1 | |
Tree-based ortholog | many-to-many | LJ1G048400 LJ1G048410 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G048400 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD01G012850 MD09G028380 MD14G008770 | 3 | |
Tree-based ortholog | many-to-many | MD00G358590 MD00G473070 MD02G006220 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD01G012850 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME06908G00280 ME09692G00070 ME11287G00050 | 3 | |
Tree-based ortholog | many-to-1 | ME07430G00060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07430G00060 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G051385 MT3G069160 MT3G069180 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G081250 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G02030 OS10G35940 | 2 | |
Tree-based ortholog | many-to-many | OS09G25370 OS03G52970 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G02030 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL09G01660 | 1 | |
Tree-based ortholog | many-to-1 | OL07G03600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL07G03600 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00196G00060 PP00210G00230 | 2 | |
Tree-based ortholog | many-to-many | PP00249G00450 PP00084G00410 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00249G00450 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT06G04540 PT08G06060 PT10G19780 ... | 4 | |
Tree-based ortholog | many-to-1 | PT03G18690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G19780 PT08G06060 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_002G23200 PPE_003G13140 | 2 | |
Tree-based ortholog | many-to-1 | PPE_007G23460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G23200 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC28470G00160 RC30143G00370 | 2 | |
Tree-based ortholog | many-to-1 | RC29716G00100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30143G00370 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL05G052920 | 1 | |
Tree-based ortholog | many-to-many | SL02G080790 SL02G080800 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G052920 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST04G014580 ST05G025620 | 2 | |
Tree-based ortholog | many-to-many | ST02G023900 ST02G023890 ST02G023930 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G025620 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP3G08440 TP5G06840 TP6G36910 | 3 | |
Tree-based ortholog | many-to-1 | TP6G36980 | 1 | ||
Anchor point | 1-to-1 | TP6G36980 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G36910 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0005G14640 | 1 | |
Tree-based ortholog | many-to-1 | TC0010G00380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G03210 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV08G09670 VV13G04640 | 2 | |
Tree-based ortholog | many-to-1 | VV17G07460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G04640 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM09G29480 | 1 | |
Tree-based ortholog | many-to-1 | ZM02G17760 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM09G29480 | 1 |