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Integrative Orthology Viewer:
BR01G12480
(Brassica rapa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Brassica rapa | Orthologous gene family | BR01G12480 | 1 |  |
| Tree-based ortholog | BR01G12480 | 1 | ||
| Anchor point | BR03G46270 BR03G26310 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | BR01G12480 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00020G01080 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00020G01080 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL7G20000 | 1 | |
| Anchor point | many-to-many | AL7G20000 AL6G36080 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G20000 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | 1-to-1 | AT4G22250 | 1 | |
| Anchor point | many-to-many | AT4G22250 AT4G03965 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G22250 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV8G12450 | 1 | |
| Anchor point | many-to-1 | BV8G12450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV8G12450 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-1 | CRU_007G18150 | 1 | |
| Anchor point | many-to-many | CRU_006G30840 CRU_007G18150 CRU_002G02520 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G18150 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP45104G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP45104G00010 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL01G21720 | 1 | |
| Anchor point | many-to-1 | CL01G21720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G21720 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00007G03350 | 1 | |
| Anchor point | many-to-1 | CS00007G03350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00007G03350 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00007G04490 | 1 | |
| Anchor point | many-to-1 | CM00007G04490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00007G04490 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0005G29970 | 1 | |
| Anchor point | many-to-many | EG0011G06300 EG0005G29970 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0005G29970 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV3G01790 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G01790 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM07G39410 GM17G01340 | 2 | |
| Anchor point | many-to-many | GM07G39410 GM09G01090 GM15G11920 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM17G01340 GM07G39410 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-1 | GR10G18480 | 1 | |
| Anchor point | many-to-many | GR10G18480 GR09G18240 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G18240 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ4G001580 | 1 | |
| Anchor point | many-to-1 | LJ6G021800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G021800 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD00G340250 MD00G212400 MD05G001030 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G212400 MD00G340250 MD05G001030 | 3 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-1 | ME00372G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME05214G00410 ME04134G00040 | 2 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-1 | MT4G132760 | 1 | |
| Anchor point | many-to-1 | MT2G025080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G025080 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS01G68900 | 1 | |
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00097G00280 PP00039G00630 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00097G00280 PP00039G00630 | 2 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-1 | PT14G15890 | 1 | |
| Anchor point | many-to-many | PT04G00310 PT02G22420 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT04G00310 | 1 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_004G01290 | 1 | |
| Anchor point | many-to-1 | PPE_004G01290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G01290 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC29842G00220 | 1 | |
| Anchor point | many-to-1 | RC29842G00220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29842G00220 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL02G081180 SL03G031830 | 2 | |
| Anchor point | many-to-many | SL07G049400 SL02G081180 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G081180 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST02G024290 ST03G008340 | 2 | |
| Anchor point | many-to-1 | ST02G024290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G024290 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP7G20370 | 1 | |
| Tree-based ortholog | 1-to-1 | TP7G20370 | 1 | ||
| Anchor point | many-to-many | TP7G20370 TP6G04740 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G20370 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0006G22210 | 1 | |
| Anchor point | many-to-1 | TC0006G22210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0006G22210 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV12G11430 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV12G11430 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM03G23050 ZM08G29190 | 2 | |