Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
BR01G10490
(Brassica rapa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Brassica rapa | Orthologous gene family | BR01G10490 | 1 |  |
| Tree-based ortholog | BR01G10490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | BR01G10490 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-many | ATR_00028G00570 ATR_00013G00180 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00013G00180 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL7G22960 | 1 | |
| Tree-based ortholog | 1-to-1 | AL7G22960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G22960 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT4G19590 | 1 | |
| Tree-based ortholog | 1-to-1 | AT4G19590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G19590 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-many | BV3G02470 BV9G06490 BV6G11480 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G41350 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_007G20630 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_007G20630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G20630 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-many | CP00405G00040 CP00013G00970 CP00013G00950 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00405G00040 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR09G11680 | 1 | |
| Citrullus lanatus | Tree-based ortholog | 1-to-many | CL01G00400 CL02G02810 CL07G18130 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G00400 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-many | CS00104G00110 CS00077G00180 CS00003G00420 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00003G00420 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-many | CM00005G08600 CM00066G00770 CM00031G02360 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00005G08600 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0001G12170 EG0011G05500 EG0007G14490 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G14490 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-many | FV0G12970 FV7G36780 FV6G32340 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G06330 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM04G41630 GM06G13181 GM13G08101 ... | 10 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM04G41630 GM06G13181 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-many | GR06G20090 GR12G00370 GR01G19170 ... | 7 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR12G00370 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ1G013110 LJ2G049460 LJ6G001960 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G013110 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD07G019680 MD01G021510 MD00G367280 ... | 10 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G415340 MD13G009240 | 2 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME09761G00390 ME02815G00090 ME08877G00060 ... | 7 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME10097G00050 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-many | MT3G091040 MT3G082810 MT5G097170 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G091040 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS01G69930 OS03G28310 OS02G30620 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G28310 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL01G05860 | 1 | |
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00193G00240 PP00128G00090 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00193G00240 PP00128G00090 | 2 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT15G02020 PT12G00110 PT02G22100 ... | 9 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT03G17120 PT01G05720 | 2 | ||
| Prunus persica | Tree-based ortholog | 1-to-many | PPE_002G29540 PPE_003G18110 PPE_001G23380 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G23380 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-many | RC30169G02940 RC28859G00190 RC29939G00130 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29939G00130 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL03G007280 SL07G047690 SL05G040050 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G007280 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST03G013540 ST07G017860 ST05G019050 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G013540 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP7G18160 | 1 | |
| Tree-based ortholog | 1-to-1 | TP7G18160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G18160 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-many | TC0003G19490 TC0001G18690 TC0002G20200 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G19490 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-many | VV01G04880 VV16G06760 VV12G09500 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV16G06760 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM08G28800 ZM10G17950 ZM10G17970 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM10G17950 ZM10G17970 | 2 |