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Integrative Orthology Viewer:
ATR_00170G00060
(Amborella trichopoda)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | ATR_00170G00060 | 1 |  |
| Tree-based ortholog | ATR_00170G00060 ATR_00023G00730 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | ATR_00170G00060 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis lyrata | Tree-based ortholog | many-to-1 | AL4G19430 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G05430 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | many-to-1 | AT2G34200 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G05830 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV8G10360 | 1 | |
| Tree-based ortholog | many-to-1 | BV8G10360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV8G10360 | 1 | ||
| Brassica rapa | Tree-based ortholog | many-to-many | BR03G16990 BR05G10300 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G00410 | 1 | ||
| Capsella rubella | Tree-based ortholog | many-to-1 | CRU_004G15320 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G00770 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00386G00020 | 1 | |
| Tree-based ortholog | many-to-1 | CP00386G00020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00386G00020 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | many-to-1 | CL07G01070 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G23950 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00007G01280 | 1 | |
| Tree-based ortholog | many-to-1 | CS00007G01280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00007G01280 | 1 | ||
| Cucumis melo | Tree-based ortholog | many-to-many | CM00004G03300 CM00007G02260 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00007G02260 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0004G03760 | 1 | |
| Tree-based ortholog | many-to-1 | EG0004G03760 | 1 | ||
| Anchor point | N/A | EG0004G03760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0004G03760 | 1 | ||
| Fragaria vesca | Tree-based ortholog | many-to-many | FV7G28630 FV6G11660 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G28630 | 1 | ||
| Glycine max | Tree-based ortholog | many-to-many | GM13G30030 GM15G09110 GM06G06860 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM04G06770 GM13G30030 GM06G06860 ... | 4 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR11G03830 | 1 | |
| Tree-based ortholog | many-to-many | GR06G08960 GR11G03830 GR10G24150 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR10G24150 | 1 | ||
| Lotus japonicus | Tree-based ortholog | many-to-1 | LJ4G041850 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G041850 | 1 | ||
| Malus domestica | Tree-based ortholog | many-to-many | MD14G016540 MD01G023050 MD05G021540 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD14G016540 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME05780G00070 ME06039G00160 | 2 | |
| Tree-based ortholog | many-to-many | ME05780G00070 ME06039G00160 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME06039G00160 ME05780G00070 | 2 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT2G016520 | 1 | |
| Tree-based ortholog | many-to-many | MT8G086580 MT4G086500 MT8G086550 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G016520 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS01G53130 | 1 | |
| Tree-based ortholog | many-to-many | OS01G53130 OS05G11720 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G37900 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | many-to-many | PP00073G00020 PP00184G00180 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00184G00180 PP00073G00020 | 2 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT04G05920 PT11G06880 | 2 | |
| Tree-based ortholog | many-to-many | PT04G05920 PT11G06880 | 2 | ||
| Anchor point | N/A | PT04G05920 PT11G06880 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT04G05920 PT11G06880 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_004G06180 | 1 | |
| Tree-based ortholog | many-to-1 | PPE_004G06180 | 1 | ||
| Anchor point | N/A | PPE_004G06180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G06180 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30026G00110 | 1 | |
| Tree-based ortholog | many-to-1 | RC30026G00110 | 1 | ||
| Anchor point | N/A | RC30026G00110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30026G00110 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL03G006060 | 1 | |
| Tree-based ortholog | many-to-many | SL02G072270 SL03G006060 | 2 | ||
| Anchor point | N/A | SL02G072270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G006060 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST03G005090 | 1 | |
| Tree-based ortholog | many-to-many | ST02G018830 ST03G005090 | 2 | ||
| Anchor point | N/A | ST02G018830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G005090 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | many-to-1 | TP4G16510 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G37070 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0006G16410 | 1 | |
| Tree-based ortholog | many-to-1 | TC0006G16410 | 1 | ||
| Anchor point | N/A | TC0006G16410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0006G16410 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV10G02370 | 1 | |
| Tree-based ortholog | many-to-1 | VV10G02370 | 1 | ||
| Anchor point | N/A | VV10G02370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV10G02370 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM08G27010 | 1 | |
| Tree-based ortholog | many-to-many | ZM08G01510 ZM08G17760 ZM06G25470 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G26850 | 1 |