Integrative Orthology Viewer: ATR_00169G00230 (Amborella trichopoda)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | ATR_00169G00230 | 1 | |
Tree-based ortholog | ATR_00169G00230 ATR_00007G02120 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | ATR_00169G00230 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL6G19750 | 1 | |
Tree-based ortholog | many-to-many | AL6G19750 AL6G12120 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G19750 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT5G19480 | 1 | |
Tree-based ortholog | many-to-many | AT5G19480 AT5G12230 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G12230 | 1 | ||
Beta vulgaris | Orthologous gene family | 1-to-1 | BV5G11810 | 1 | |
Tree-based ortholog | many-to-1 | BV5G11810 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G11810 | 1 | ||
Brassica rapa | Orthologous gene family | 1-to-1 | BR10G15430 | 1 | |
Tree-based ortholog | many-to-many | BR10G15430 BR10G21720 BR03G04870 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G15430 | 1 | ||
Carica papaya | Orthologous gene family | 1-to-1 | CP00033G01300 | 1 | |
Tree-based ortholog | many-to-1 | CP00033G01300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00033G01300 | 1 | ||
Citrullus lanatus | Orthologous gene family | 1-to-1 | CL09G07460 | 1 | |
Tree-based ortholog | many-to-1 | CL09G07460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G07460 | 1 | ||
Citrus sinensis | Tree-based ortholog | many-to-many | CS00500G00160 CS00010G00760 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00500G00160 | 1 | ||
Cucumis melo | Orthologous gene family | 1-to-1 | CM00017G02270 | 1 | |
Tree-based ortholog | many-to-1 | CM00017G02270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00017G02270 | 1 | ||
Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0008G05920 | 1 | |
Tree-based ortholog | many-to-many | EG0008G05920 EG0011G19590 EG0004G01810 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G05920 | 1 | ||
Fragaria vesca | Orthologous gene family | 1-to-1 | FV2G12900 | 1 | |
Tree-based ortholog | many-to-many | FV2G12900 FV3G16070 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G12900 | 1 | ||
Glycine max | Orthologous gene family | 1-to-many | GM07G06450 GM16G03060 | 2 | |
Tree-based ortholog | many-to-many | GM04G00310 GM06G00360 GM16G03060 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM07G06450 | 1 | ||
Gossypium raimondii | Orthologous gene family | 1-to-many | GR00G00780 GR01G22620 | 2 | |
Tree-based ortholog | many-to-many | GR01G22620 GR00G00780 GR04G06030 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR00G00780 | 1 | ||
Lotus japonicus | Tree-based ortholog | many-to-1 | LJ3G046180 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G046180 | 1 | ||
Malus domestica | Tree-based ortholog | many-to-many | MD00G050860 MD05G007400 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G050860 | 1 | ||
Manihot esculenta | Orthologous gene family | 1-to-many | ME01072G00140 ME06485G00050 | 2 | |
Tree-based ortholog | many-to-many | ME01072G00140 ME06485G00050 ME04251G00270 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME01072G00140 | 1 | ||
Medicago truncatula | Orthologous gene family | 1-to-1 | MT8G028015 | 1 | |
Tree-based ortholog | many-to-many | MT8G028015 MT8G079890 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G028015 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | 1-to-many | OS03G44010 OS12G41962 | 2 | |
Tree-based ortholog | many-to-many | OS03G44010 OS12G41962 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS12G41962 | 1 | ||
Physcomitrella patens | Tree-based ortholog | many-to-many | PP00028G00440 PP00007G01580 PP00313G00140 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00007G01580 PP00028G00440 PP00313G00140 | 3 | ||
Populus trichocarpa | Orthologous gene family | 1-to-1 | PT09G15620 | 1 | |
Tree-based ortholog | many-to-many | PT09G15620 PT04G19380 PT14G17450 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT09G15620 | 1 | ||
Prunus persica | Orthologous gene family | 1-to-1 | PPE_008G20170 | 1 | |
Tree-based ortholog | many-to-many | PPE_008G20170 PPE_004G08290 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G08290 | 1 | ||
Ricinus communis | Orthologous gene family | 1-to-1 | RC27866G00160 | 1 | |
Tree-based ortholog | many-to-many | RC27866G00160 RC30059G00060 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC27866G00160 | 1 | ||
Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL06G082900 | 1 | |
Tree-based ortholog | many-to-many | SL06G007660 SL06G082900 SL09G020010 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G082900 | 1 | ||
Solanum tuberosum | Orthologous gene family | 1-to-1 | ST06G035350 | 1 | |
Tree-based ortholog | many-to-many | ST06G006880 ST06G035350 ST09G017060 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G035350 | 1 | ||
Thellungiella parvula | Orthologous gene family | 1-to-1 | TP6G24930 | 1 | |
Tree-based ortholog | many-to-many | TP6G24930 TP6G31410 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G24930 | 1 | ||
Theobroma cacao | Orthologous gene family | 1-to-1 | TC0001G20000 | 1 | |
Tree-based ortholog | many-to-many | TC0001G20000 TC0002G00920 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G20000 | 1 | ||
Vitis vinifera | Orthologous gene family | 1-to-1 | VV00G01820 | 1 | |
Tree-based ortholog | many-to-many | VV00G01820 VV10G04960 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV10G04960 | 1 | ||
Zea mays | Orthologous gene family | 1-to-many | ZM01G29380 ZM01G39540 ZM03G16580 | 3 | |
Tree-based ortholog | many-to-many | ZM01G39540 ZM03G16580 ZM01G29380 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM01G29380 ZM03G16580 | 2 |