Integrative Orthology Viewer: ATR_00097G00120 (Amborella trichopoda)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | ATR_00040G01020 ATR_00097G00120 | 2 | |
Tree-based ortholog | ATR_00097G00120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | ATR_00097G00120 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL3G10490 | 1 | |
Tree-based ortholog | 1-to-1 | AL3G10490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G10490 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT3G10230 | 1 | |
Tree-based ortholog | 1-to-1 | AT3G10230 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G10230 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV3G12410 | 1 | |
Tree-based ortholog | 1-to-1 | BV3G12410 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G12410 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-1 | BR05G32140 | 1 | |
Tree-based ortholog | 1-to-1 | BR05G32140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G32140 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_003G09000 | 1 | |
Tree-based ortholog | 1-to-1 | CRU_003G09000 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G09000 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00195G00140 | 1 | |
Tree-based ortholog | 1-to-1 | CP00195G00140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00195G00140 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR08G00280 | 1 | |
Tree-based ortholog | 1-to-1 | CR08G00280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR08G00280 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL04G02920 CL10G09090 | 2 | |
Tree-based ortholog | 1-to-1 | CL04G02920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL04G02920 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00082G00530 CS00218G00060 | 2 | |
Tree-based ortholog | 1-to-1 | CS00218G00060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00218G00060 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00031G04420 CM00045G00240 | 2 | |
Tree-based ortholog | 1-to-1 | CM00045G00240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00045G00240 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G18960 EG0002G32170 | 2 | |
Tree-based ortholog | 1-to-1 | EG0001G18960 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G18960 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV2G43260 FV6G33380 | 2 | |
Tree-based ortholog | 1-to-1 | FV6G33380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G33380 | 1 | ||
Glycine max | Orthologous gene family | many-to-1 | GM13G39150 | 1 | |
Tree-based ortholog | 1-to-many | GM03G28470 GM19G31220 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM19G31220 GM03G28470 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR06G11330 | 1 | |
Tree-based ortholog | 1-to-1 | GR13G00240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR13G00240 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ6G016700 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G016700 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD03G011640 | 1 | |
Tree-based ortholog | 1-to-1 | MD14G009340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD14G009340 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME00952G00240 ME06890G00270 | 2 | |
Tree-based ortholog | 1-to-1 | ME06890G00270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06890G00270 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT2G086700 MT2G086730 MT7G090150 | 3 | |
Tree-based ortholog | 1-to-1 | MT7G090150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G090150 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS02G09750 | 1 | |
Tree-based ortholog | 1-to-1 | OS02G09750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G09750 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL20G00700 | 1 | |
Tree-based ortholog | 1-to-many | OL20G00710 OL20G00700 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL20G00700 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00055G00930 PP00160G00720 | 2 | |
Tree-based ortholog | 1-to-many | PP00160G00720 PP00055G00930 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00055G00930 PP00160G00720 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT00G13830 PT04G19710 PT06G04310 ... | 4 | |
Tree-based ortholog | 1-to-many | PT00G13830 PT06G04310 PT16G04020 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT06G04310 PT00G13830 PT16G04020 | 3 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_006G13550 PPE_006G13560 PPE_007G06200 | 3 | |
Tree-based ortholog | 1-to-1 | PPE_007G06200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G06200 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29941G00070 RC30055G00610 | 2 | |
Tree-based ortholog | 1-to-1 | RC29941G00070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29941G00070 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL04G040190 SL06G074240 SL10G079480 | 3 | |
Tree-based ortholog | 1-to-many | SL10G079480 SL04G040190 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G079480 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST04G018690 ST06G029900 ST10G021190 | 3 | |
Tree-based ortholog | 1-to-many | ST10G021190 ST04G018690 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G021190 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP3G08510 | 1 | |
Tree-based ortholog | 1-to-1 | TP3G08510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G08510 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0009G27480 | 1 | |
Tree-based ortholog | 1-to-1 | TC0005G14310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G14310 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV08G09850 | 1 | |
Tree-based ortholog | 1-to-1 | VV08G09850 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G09850 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM05G22140 | 1 | |
Tree-based ortholog | 1-to-1 | ZM05G22140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G22140 | 1 |