Integrative Orthology Viewer: ATR_00069G01180 (Amborella trichopoda)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | ATR_00069G01180 ATR_00069G01200 | 2 | |
Tree-based ortholog | ATR_00069G01180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | ATR_00069G01180 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL2G02340 AL4G26710 | 2 | |
Tree-based ortholog | 1-to-1 | AL2G02340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G02340 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G63020 AT2G40030 | 2 | |
Tree-based ortholog | 1-to-1 | AT1G63020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G63020 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV2G16810 BV5G08060 | 2 | |
Tree-based ortholog | 1-to-1 | BV5G08060 | 1 | ||
Anchor point | N/A | BV5G08060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G08060 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR00G04470 BR03G20100 BR09G13110 | 3 | |
Tree-based ortholog | 1-to-1 | BR09G13110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G13110 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_002G01860 CRU_004G21460 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_002G01860 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G01860 | 1 | ||
Carica papaya | Tree-based ortholog | 1-to-1 | CP00029G00130 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00029G00130 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR16G09160 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR16G09160 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL01G07350 CL10G04400 | 2 | |
Tree-based ortholog | 1-to-1 | CL10G04400 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G04400 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00040G00340 CS00139G00150 | 2 | |
Tree-based ortholog | 1-to-1 | CS00040G00340 | 1 | ||
Anchor point | N/A | CS00040G00340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00040G00340 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00021G03530 | 1 | |
Tree-based ortholog | 1-to-1 | CM00021G03540 | 1 | ||
Anchor point | N/A | CM00021G03530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00021G03540 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0004G15640 EG0010G10430 | 2 | |
Tree-based ortholog | 1-to-1 | EG0004G15640 | 1 | ||
Anchor point | N/A | EG0004G15640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0004G15640 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV5G01650 FV7G16650 | 2 | |
Tree-based ortholog | 1-to-1 | FV5G01650 | 1 | ||
Anchor point | N/A | FV5G01650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G01650 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G42480 GM11G02921 GM13G26691 | 3 | |
Tree-based ortholog | 1-to-many | GM01G42480 GM11G02921 | 2 | ||
Anchor point | N/A | GM01G42480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM11G02921 GM01G42480 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR04G20730 GR07G02220 GR10G21660 | 3 | |
Tree-based ortholog | 1-to-many | GR07G02220 GR04G20730 | 2 | ||
Anchor point | N/A | GR04G20730 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G20730 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ2G028880 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G028880 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G189270 MD00G501650 MD02G011840 ... | 7 | |
Tree-based ortholog | 1-to-many | MD15G027530 MD02G011840 MD15G004410 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD15G004410 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME05875G02330 ME07035G00430 | 2 | |
Tree-based ortholog | 1-to-1 | ME07035G00430 | 1 | ||
Anchor point | N/A | ME07035G00430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07035G00430 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT5G011000 MT8G038990 | 2 | |
Tree-based ortholog | 1-to-1 | MT5G011000 | 1 | ||
Anchor point | N/A | MT4G061700 MT5G011000 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G011000 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS04G48370 | 1 | |
Tree-based ortholog | 1-to-many | OS01G73430 OS02G05880 | 2 | ||
Anchor point | N/A | OS04G48370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G05880 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL10G01380 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL02G01000 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00083G00310 PP00083G01090 PP00193G00020 | 3 | |
Tree-based ortholog | 1-to-1 | PP00193G00020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00083G01090 PP00193G00020 PP00083G00310 | 3 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G02720 PT03G19690 | 2 | |
Tree-based ortholog | 1-to-1 | PT01G11130 | 1 | ||
Anchor point | N/A | PT01G11130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT01G11130 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_002G02040 PPE_002G02060 PPE_005G09770 | 3 | |
Tree-based ortholog | 1-to-1 | PPE_005G09770 | 1 | ||
Anchor point | N/A | PPE_005G09770 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G09770 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC30131G03420 RC30190G02780 | 2 | |
Tree-based ortholog | 1-to-1 | RC30190G02780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30190G02780 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G096390 SL08G080210 | 2 | |
Tree-based ortholog | 1-to-1 | SL08G080210 | 1 | ||
Anchor point | N/A | SL08G080210 SL11G072730 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL08G080210 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G033890 ST08G026260 | 2 | |
Tree-based ortholog | 1-to-1 | ST08G026260 | 1 | ||
Anchor point | N/A | ST08G026260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST08G026260 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP2G01560 TP4G22340 | 2 | |
Tree-based ortholog | 1-to-1 | TP2G01560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G01560 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0003G26680 TC0010G15490 | 2 | |
Tree-based ortholog | 1-to-1 | TC0003G26680 | 1 | ||
Anchor point | N/A | TC0003G26680 TC0009G32790 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G26680 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV00G26270 | 1 | |
Tree-based ortholog | 1-to-1 | VV02G07340 | 1 | ||
Anchor point | N/A | VV02G07340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV02G07340 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-1 | ZM01G32620 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G32620 | 1 |