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Integrative Orthology Viewer:
ATR_00069G00760
(Amborella trichopoda)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | ATR_00069G00760 | 1 |  |
| Tree-based ortholog | ATR_00022G03630 ATR_00069G00760 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | ATR_00069G00760 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis lyrata | Tree-based ortholog | many-to-1 | AL5G34680 | 1 | |
| Anchor point | N/A | AL8G16440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G34680 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | many-to-1 | AT3G63530 | 1 | |
| Anchor point | N/A | AT5G52140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G63530 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV0G31260 | 1 | |
| Tree-based ortholog | many-to-many | BV0G31260 BV2G09720 | 2 | ||
| Anchor point | N/A | BV0G31260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G09720 | 1 | ||
| Brassica rapa | Tree-based ortholog | many-to-1 | BR04G00200 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR04G00200 | 1 | ||
| Capsella rubella | Tree-based ortholog | many-to-1 | CRU_005G28640 | 1 | |
| Anchor point | N/A | CRU_008G11990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G28640 | 1 | ||
| Carica papaya | Tree-based ortholog | many-to-1 | CP01222G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP01222G00010 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | many-to-1 | CR10G05410 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR10G05410 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | many-to-many | CL02G23290 CL09G03800 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G03800 | 1 | ||
| Citrus sinensis | Tree-based ortholog | many-to-many | CS00054G00700 CS00003G06330 | 2 | |
| Anchor point | N/A | CS00062G00440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00003G06330 | 1 | ||
| Cucumis melo | Tree-based ortholog | many-to-many | CM00022G04320 CM00060G01930 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00022G04320 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | many-to-many | EG0010G06890 EG0010G11220 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G11220 | 1 | ||
| Fragaria vesca | Tree-based ortholog | many-to-many | FV3G17810 FV6G48520 FV2G36480 ... | 7 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G29910 | 1 | ||
| Glycine max | Tree-based ortholog | many-to-many | GM12G06090 GM11G14110 GM12G36650 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM13G27330 GM12G36650 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | many-to-many | GR09G07270 GR04G01920 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR09G07270 GR04G01920 | 2 | ||
| Lotus japonicus | Tree-based ortholog | many-to-1 | LJ3G006700 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G006700 | 1 | ||
| Malus domestica | Tree-based ortholog | many-to-1 | MD00G281710 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G281710 | 1 | ||
| Manihot esculenta | Tree-based ortholog | many-to-many | ME04681G00340 ME10963G00460 ME06407G00450 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06407G00450 | 1 | ||
| Medicago truncatula | Tree-based ortholog | many-to-many | MT4G065670 MT8G037150 MT8G036640 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT8G037150 MT8G036640 | 2 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | many-to-many | OS06G03580 OS09G35690 OS04G48260 ... | 4 | |
| Anchor point | N/A | OS04G48260 OS09G35690 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G48260 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL10G02390 | 1 | |
| Physcomitrella patens | Tree-based ortholog | many-to-many | PP00283G00130 PP00056G01010 PP00081G00610 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00116G00660 | 1 | ||
| Populus trichocarpa | Tree-based ortholog | many-to-many | PT01G01960 PT03G20450 PT09G06210 ... | 4 | |
| Anchor point | N/A | PT15G13870 PT07G04550 PT12G13640 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT09G06210 PT01G26770 | 2 | ||
| Prunus persica | Tree-based ortholog | many-to-many | PPE_004G25130 PPE_002G07200 | 2 | |
| Anchor point | N/A | PPE_002G27790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G07200 | 1 | ||
| Ricinus communis | Tree-based ortholog | many-to-1 | RC29212G00120 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29212G00120 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL03G026150 | 1 | |
| Tree-based ortholog | many-to-many | SL03G026150 SL11G062260 SL01G087060 | 3 | ||
| Anchor point | N/A | SL03G026150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G026150 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST03G014980 | 1 | |
| Tree-based ortholog | many-to-many | ST03G014980 ST11G021220 ST01G026430 | 3 | ||
| Anchor point | N/A | ST03G014980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G014980 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | many-to-1 | TP5G00050 | 1 | |
| Anchor point | N/A | TP6G14370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G17930 | 1 | ||
| Theobroma cacao | Tree-based ortholog | many-to-many | TC0009G22650 TC0001G40610 | 2 | |
| Anchor point | N/A | TC0003G17290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G40610 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV12G03580 | 1 | |
| Tree-based ortholog | many-to-many | VV12G03580 VV06G06220 VV13G07670 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G07670 | 1 | ||
| Zea mays | Tree-based ortholog | many-to-many | ZM09G06120 ZM06G07330 ZM07G19860 ... | 6 | |
| Anchor point | N/A | ZM02G06940 ZM07G19860 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM09G27640 ZM01G05220 | 2 |