Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
ATR_00066G01070
(Amborella trichopoda)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | ATR_00066G01070 | 1 |  |
| Tree-based ortholog | ATR_00066G01070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | ATR_00066G01070 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL3G04250 | 1 | |
| Tree-based ortholog | 1-to-1 | AL3G04250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G04250 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT3G04600 | 1 | |
| Tree-based ortholog | 1-to-1 | AT3G04600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G04600 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV4G06160 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G06160 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR01G40650 BR01G40790 | 2 | |
| Tree-based ortholog | 1-to-many | BR09G25100 BR03G29600 BR01G40790 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G29600 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_003G03590 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_003G03590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G03590 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP01142G00040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP01142G00040 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR12G08470 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G08470 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL09G11460 | 1 | |
| Tree-based ortholog | 1-to-1 | CL09G11460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G11460 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00005G01340 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00005G01340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00005G01340 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-many | CM00003G04710 CM00029G00440 | 2 | |
| Tree-based ortholog | 1-to-1 | CM00029G00440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00029G00440 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-many | EG0002G11300 EG0002G13410 | 2 | |
| Tree-based ortholog | 1-to-many | EG0002G13410 EG0002G11300 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0002G11300 EG0002G13410 | 2 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV4G09060 | 1 | |
| Tree-based ortholog | 1-to-1 | FV4G09060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G09060 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM13G11390 GM03G25740 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM03G25740 GM13G11390 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR06G11860 | 1 | |
| Tree-based ortholog | 1-to-1 | GR06G11860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G11860 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ4G037030 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ4G037030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G037030 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD12G024850 MD04G019290 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD12G024850 MD04G019290 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME08974G00070 | 1 | |
| Tree-based ortholog | 1-to-1 | ME08974G00070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08974G00070 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT1G063040 | 1 | |
| Tree-based ortholog | 1-to-1 | MT8G007305 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G007305 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS12G35570 OS07G17770 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS12G35570 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL06G01730 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL06G01730 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00022G01740 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00022G01740 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT09G15930 | 1 | |
| Tree-based ortholog | 1-to-1 | PT09G15930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT09G15930 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-many | PPE_007G07160 PPE_007G07270 | 2 | |
| Tree-based ortholog | 1-to-many | PPE_007G07160 PPE_007G07270 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PPE_007G07270 PPE_007G07160 | 2 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC29708G00040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29708G00040 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL08G074410 | 1 | |
| Tree-based ortholog | 1-to-1 | SL08G074410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL08G074410 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST08G017640 | 1 | |
| Tree-based ortholog | 1-to-1 | ST08G017640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST08G017640 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP3G03440 | 1 | |
| Tree-based ortholog | 1-to-many | TP6G11650 TP3G03440 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G03440 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0009G26060 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0009G26060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G26060 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV12G01790 | 1 | |
| Tree-based ortholog | 1-to-1 | VV12G01790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV12G01790 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-1 | ZM01G49900 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G49900 | 1 |