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Integrative Orthology Viewer:
ATR_00055G01530
(Amborella trichopoda)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | ATR_00055G01530 ATR_00062G01200 | 2 |  |
| Tree-based ortholog | ATR_00055G01530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | ATR_00055G01530 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL2G18550 AL8G20200 | 2 | |
| Tree-based ortholog | 1-to-many | AL2G18550 AL6G25360 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G18550 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G70160 AT4G27020 AT5G54870 | 3 | |
| Tree-based ortholog | 1-to-1 | AT1G70160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G70160 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV4G00250 BV6G03770 | 2 | |
| Tree-based ortholog | 1-to-1 | BV6G03770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G03770 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR01G17340 BR02G14850 BR02G20200 ... | 6 | |
| Tree-based ortholog | 1-to-many | BR07G26870 BR02G20200 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR07G26870 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_002G15910 CRU_007G13030 CRU_008G14800 | 3 | |
| Tree-based ortholog | 1-to-1 | CRU_002G15910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G15910 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00005G03260 CP00097G00220 CP00097G00260 | 3 | |
| Tree-based ortholog | 1-to-1 | CP00005G03260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00005G03260 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL05G15650 CL05G15660 CL05G25900 | 3 | |
| Tree-based ortholog | 1-to-1 | CL05G25900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G25900 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00003G03230 CS00046G00210 | 2 | |
| Tree-based ortholog | 1-to-1 | CS00003G03230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00003G03230 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00016G03490 CM00032G00540 CM00032G00570 | 3 | |
| Tree-based ortholog | 1-to-1 | CM00016G03490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00016G03490 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G20810 EG0006G04710 EG0006G06630 ... | 8 | |
| Tree-based ortholog | 1-to-1 | EG0002G20810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G20810 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV3G24660 FV4G22530 | 2 | |
| Tree-based ortholog | 1-to-1 | FV4G22530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G22530 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM01G04400 GM02G03160 GM02G45930 ... | 5 | |
| Tree-based ortholog | 1-to-many | GM18G17367 GM02G03160 GM01G04400 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM18G17367 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR02G08780 GR09G34520 GR09G43500 | 3 | |
| Tree-based ortholog | 1-to-1 | GR09G34520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G34520 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ2G022820 LJ2G047650 LJ3G015320 | 3 | |
| Tree-based ortholog | 1-to-many | LJ3G015320 LJ2G022820 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G022820 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G150450 MD00G431340 MD05G003160 ... | 6 | |
| Tree-based ortholog | 1-to-many | MD16G004720 MD00G150450 MD13G005830 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD13G005830 MD16G004720 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME01778G00080 ME03241G00470 ME11495G01110 | 3 | |
| Tree-based ortholog | 1-to-1 | ME11495G01110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME11495G01110 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT5G036420 MT5G092140 | 2 | |
| Tree-based ortholog | 1-to-1 | MT5G036420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G036420 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G58114 OS08G32910 OS09G22440 | 3 | |
| Tree-based ortholog | 1-to-many | OS08G32910 OS09G22440 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS09G22440 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00191G00600 PP00307G00400 | 2 | |
| Tree-based ortholog | 1-to-many | PP00191G00600 PP00307G00400 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00307G00400 PP00191G00600 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G42450 PT10G03690 PT11G13770 | 3 | |
| Tree-based ortholog | 1-to-1 | PT10G03690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT10G03690 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_001G27250 PPE_004G20200 PPE_004G20210 | 3 | |
| Tree-based ortholog | 1-to-1 | PPE_001G27250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G27250 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29666G00290 RC29736G01030 | 2 | |
| Tree-based ortholog | 1-to-1 | RC29736G01030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29736G01030 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL05G006400 SL07G064420 SL07G064440 ... | 4 | |
| Tree-based ortholog | 1-to-1 | SL05G006400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G006400 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST05G012050 ST07G029370 ST07G029380 ... | 4 | |
| Tree-based ortholog | 1-to-1 | ST05G012050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G012050 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP5G25270 TP6G16840 | 2 | |
| Tree-based ortholog | 1-to-1 | TP5G25270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G25270 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0002G23960 TC0007G04080 | 2 | |
| Tree-based ortholog | 1-to-1 | TC0002G23960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G23960 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV01G13290 VV19G10250 VV19G10280 | 3 | |
| Tree-based ortholog | 1-to-1 | VV01G13290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G13290 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM04G13620 ZM07G13300 ZM08G33610 | 3 | |
| Tree-based ortholog | 1-to-many | ZM04G13620 ZM07G13300 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM07G13300 | 1 |