Integrative Orthology Viewer: ATR_00048G01840 (Amborella trichopoda)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | ATR_00048G01840 | 1 | |
Tree-based ortholog | ATR_00048G01840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | ATR_00048G01840 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | 1-to-many | AL1G33090 AL4G20950 | 2 | |
Tree-based ortholog | 1-to-many | AL1G33090 AL4G20950 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G33090 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | 1-to-many | AT1G31880 AT2G35600 | 2 | |
Tree-based ortholog | 1-to-many | AT1G31880 AT2G35600 | 2 | ||
Anchor point | N/A | AT1G31880 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G31880 | 1 | ||
Beta vulgaris | Orthologous gene family | 1-to-1 | BV5G18690 | 1 | |
Tree-based ortholog | 1-to-1 | BV5G18690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G03060 | 1 | ||
Brassica rapa | Orthologous gene family | 1-to-many | BR04G21070 BR05G09120 BR05G20400 ... | 5 | |
Tree-based ortholog | 1-to-many | BR05G20400 BR08G08790 BR09G27000 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G27000 | 1 | ||
Capsella rubella | Orthologous gene family | 1-to-many | CRU_001G28820 CRU_004G16690 | 2 | |
Tree-based ortholog | 1-to-many | CRU_001G28820 CRU_004G16690 | 2 | ||
Anchor point | N/A | CRU_001G28820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G28820 | 1 | ||
Carica papaya | Orthologous gene family | 1-to-1 | CP00024G00600 | 1 | |
Tree-based ortholog | 1-to-1 | CP00024G00600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00024G00600 | 1 | ||
Citrullus lanatus | Orthologous gene family | 1-to-1 | CL10G01070 | 1 | |
Tree-based ortholog | 1-to-1 | CL10G01070 | 1 | ||
Anchor point | N/A | CL10G01070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G01070 | 1 | ||
Citrus sinensis | Orthologous gene family | 1-to-1 | CS00210G00040 | 1 | |
Tree-based ortholog | 1-to-1 | CS00210G00040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00210G00040 | 1 | ||
Cucumis melo | Orthologous gene family | 1-to-1 | CM00021G01070 | 1 | |
Tree-based ortholog | 1-to-1 | CM00021G01070 | 1 | ||
Anchor point | N/A | CM00021G01070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00067G01450 | 1 | ||
Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0004G21650 | 1 | |
Tree-based ortholog | 1-to-1 | EG0004G21650 | 1 | ||
Anchor point | N/A | EG0004G21650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0003G06880 | 1 | ||
Fragaria vesca | Orthologous gene family | 1-to-1 | FV0G28680 | 1 | |
Tree-based ortholog | 1-to-1 | FV0G28680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G28680 | 1 | ||
Glycine max | Orthologous gene family | 1-to-many | GM01G35180 GM09G34601 GM16G08070 ... | 4 | |
Tree-based ortholog | 1-to-many | GM16G08070 GM16G17590 GM09G34601 ... | 4 | ||
Anchor point | N/A | GM01G35180 GM09G34601 GM16G17590 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM16G08070 GM16G17590 | 2 | ||
Gossypium raimondii | Orthologous gene family | 1-to-1 | GR08G22080 | 1 | |
Tree-based ortholog | 1-to-1 | GR08G22080 | 1 | ||
Anchor point | N/A | GR08G22080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G22080 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-many | LJ4G036410 LJ3G036950 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G036410 | 1 | ||
Malus domestica | Orthologous gene family | 1-to-1 | MD06G001540 | 1 | |
Tree-based ortholog | 1-to-1 | MD06G001540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD06G001540 | 1 | ||
Manihot esculenta | Orthologous gene family | 1-to-1 | ME00560G00010 | 1 | |
Tree-based ortholog | 1-to-many | ME00560G00010 ME00376G00020 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME05875G00950 | 1 | ||
Medicago truncatula | Orthologous gene family | 1-to-1 | MT8G071220 | 1 | |
Tree-based ortholog | 1-to-many | MT8G071220 MT5G026970 | 2 | ||
Anchor point | N/A | MT5G026970 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G019620 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS02G47230 | 1 | |
Tree-based ortholog | 1-to-many | OS03G63650 OS02G47230 OS04G51172 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS08G36020 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL10G01110 | 1 | |
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00036G01660 PP00202G00530 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00202G00530 PP00036G01660 | 2 | ||
Populus trichocarpa | Orthologous gene family | 1-to-many | PT01G13180 PT03G10150 | 2 | |
Tree-based ortholog | 1-to-many | PT03G10150 PT01G13180 | 2 | ||
Anchor point | N/A | PT03G10150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT03G10150 PT01G13180 | 2 | ||
Prunus persica | Orthologous gene family | 1-to-1 | PPE_005G02350 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_005G02350 | 1 | ||
Anchor point | N/A | PPE_005G02350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G02350 | 1 | ||
Ricinus communis | Orthologous gene family | 1-to-1 | RC29827G00580 | 1 | |
Tree-based ortholog | 1-to-1 | RC29827G00580 | 1 | ||
Anchor point | N/A | RC29827G00580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29706G00320 | 1 | ||
Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL08G075920 | 1 | |
Tree-based ortholog | 1-to-many | SL12G096110 SL08G005460 SL08G075920 | 3 | ||
Anchor point | N/A | SL08G005460 SL08G075920 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL08G075920 | 1 | ||
Solanum tuberosum | Orthologous gene family | 1-to-1 | ST08G020990 | 1 | |
Tree-based ortholog | 1-to-many | ST12G028470 ST08G008500 ST08G020990 | 3 | ||
Anchor point | N/A | ST08G020990 ST08G008500 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST08G020990 | 1 | ||
Thellungiella parvula | Orthologous gene family | 1-to-many | TP1G27600 TP4G17810 | 2 | |
Tree-based ortholog | 1-to-many | TP1G27600 TP4G17810 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G12250 | 1 | ||
Theobroma cacao | Orthologous gene family | 1-to-1 | TC0003G31130 | 1 | |
Tree-based ortholog | 1-to-1 | TC0003G31130 | 1 | ||
Anchor point | N/A | TC0003G31130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G31130 | 1 | ||
Vitis vinifera | Orthologous gene family | 1-to-1 | VV02G08410 | 1 | |
Tree-based ortholog | 1-to-1 | VV02G08410 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV02G08410 | 1 | ||
Zea mays | Orthologous gene family | 1-to-1 | ZM02G05460 | 1 | |
Tree-based ortholog | 1-to-many | ZM01G59840 ZM05G37610 ZM02G05460 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM07G15520 ZM02G31230 | 2 |