Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
ATR_00036G01590
(Amborella trichopoda)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | ATR_00036G01590 | 1 |  |
| Tree-based ortholog | ATR_00036G01590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | ATR_00036G01590 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL4G19210 | 1 | |
| Tree-based ortholog | 1-to-1 | AL4G19210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G19210 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT2G33855 | 1 | |
| Tree-based ortholog | 1-to-1 | AT2G33855 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G33855 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV8G11760 | 1 | |
| Tree-based ortholog | 1-to-1 | BV8G11760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV8G11760 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR04G20220 | 1 | |
| Tree-based ortholog | 1-to-1 | BR04G20220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR04G20220 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_004G15070 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_004G15070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G15070 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00027G00060 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00027G00060 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL01G23330 | 1 | |
| Tree-based ortholog | 1-to-1 | CL01G23330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G23330 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00007G00320 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00007G00320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00007G00320 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00007G02840 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00007G02840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00007G02840 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0004G04750 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0004G04750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0004G04750 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV3G13020 | 1 | |
| Tree-based ortholog | 1-to-1 | FV3G13020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G13020 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-1 | GM13G30940 | 1 | |
| Tree-based ortholog | 1-to-1 | GM13G30940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM13G30940 | 1 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR09G16690 | 1 | |
| Tree-based ortholog | 1-to-1 | GR09G16690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G16690 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ6G026520 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ6G026520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G026520 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME06212G00030 | 1 | |
| Tree-based ortholog | 1-to-many | ME06212G00030 ME04851G00440 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06212G00030 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT2G014430 | 1 | |
| Tree-based ortholog | 1-to-1 | MT2G014430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G014430 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS04G39950 | 1 | |
| Tree-based ortholog | 1-to-1 | OS04G39950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G39950 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-1 | PP00323G00100 | 1 | |
| Tree-based ortholog | 1-to-1 | PP00323G00100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00323G00100 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT04G04840 | 1 | |
| Tree-based ortholog | 1-to-1 | PT04G04840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT04G04840 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_004G04960 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_004G04960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G04960 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30190G00140 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30190G00140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30190G00140 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL02G077700 | 1 | |
| Tree-based ortholog | 1-to-1 | SL02G077700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G077700 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST02G020350 | 1 | |
| Tree-based ortholog | 1-to-1 | ST02G020350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G020350 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP4G16270 | 1 | |
| Tree-based ortholog | 1-to-1 | TP4G16270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G16270 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0006G17730 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0006G17730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0006G17730 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM02G12450 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM02G12450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G12450 | 1 |