Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
ATR_00034G00500
(Amborella trichopoda)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | ATR_00034G00490 ATR_00034G00500 | 2 |  |
| Tree-based ortholog | ATR_00034G00500 ATR_00034G00490 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | ATR_00034G00500 ATR_00034G00490 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis lyrata | Tree-based ortholog | many-to-many | AL8G34450 AL5G25220 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL5G25220 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | many-to-many | AT5G66220 AT3G55120 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G55120 | 1 | ||
| Beta vulgaris | Tree-based ortholog | many-to-1 | BV2G18850 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV2G00960 | 1 | ||
| Brassica rapa | Tree-based ortholog | many-to-many | BR09G36130 BR03G54910 BR09G36100 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR09G36100 | 1 | ||
| Capsella rubella | Tree-based ortholog | many-to-many | CRU_008G27430 CRU_005G20480 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_005G20480 | 1 | ||
| Carica papaya | Tree-based ortholog | many-to-1 | CP01855G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP01855G00010 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | many-to-1 | CL09G20600 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL09G20600 | 1 | ||
| Citrus sinensis | Tree-based ortholog | many-to-1 | CS00024G01420 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00024G01420 | 1 | ||
| Cucumis melo | Tree-based ortholog | many-to-1 | CM00079G00530 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00079G00530 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | many-to-many | EG0010G10160 EG0010G10170 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0006G32630 | 1 | ||
| Fragaria vesca | Tree-based ortholog | many-to-1 | FV7G25290 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV7G25290 | 1 | ||
| Glycine max | Tree-based ortholog | many-to-many | GM20G38560 GM10G43850 GM20G38570 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GM20G38580 | 1 | ||
| Gossypium raimondii | Tree-based ortholog | many-to-1 | GR13G02340 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR13G02340 | 1 | ||
| Lotus japonicus | Tree-based ortholog | many-to-many | LJ5G041030 LJ5G041040 LJ5G041020 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ5G041050 | 1 | ||
| Malus domestica | Tree-based ortholog | many-to-many | MD14G007140 MD01G010310 MD00G480680 ... | 18 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD01G010290 MD00G338340 MD01G010320 ... | 5 | ||
| Manihot esculenta | Tree-based ortholog | many-to-1 | ME12004G00220 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME12004G00220 | 1 | ||
| Medicago truncatula | Tree-based ortholog | many-to-many | MT1G115820 MT1G115840 MT1G115850 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MT1G115890 MT1G115870 | 2 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-many | OS12G02370 OS11G02440 | 2 | |
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00159G00040 PP00110G00090 | 2 | |
| Populus trichocarpa | Tree-based ortholog | many-to-1 | PT10G21300 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT10G21300 | 1 | ||
| Prunus persica | Tree-based ortholog | many-to-1 | PPE_002G21740 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_002G21740 | 1 | ||
| Ricinus communis | Tree-based ortholog | many-to-1 | RC29740G00170 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29740G00170 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | many-to-many | SL05G010310 SL05G010320 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL05G010320 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | many-to-many | ST05G006830 ST05G006820 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST05G006820 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | many-to-1 | TP5G07300 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP5G07300 | 1 | ||
| Theobroma cacao | Tree-based ortholog | many-to-1 | TC0010G05740 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0010G05740 | 1 | ||
| Vitis vinifera | Tree-based ortholog | many-to-1 | VV13G08740 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV13G08740 | 1 | ||
| Zea mays | Tree-based ortholog | many-to-many | ZM05G01610 ZM01G57770 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM01G57770 ZM05G01610 | 2 |