Integrative Orthology Viewer: ATR_00029G04400 (Amborella trichopoda)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | ATR_00029G04400 | 1 | |
Tree-based ortholog | ATR_00029G04400 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | ATR_00029G04400 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis lyrata | Tree-based ortholog | 1-to-many | AL4G24390 AL6G00610 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G00610 | 1 | ||
Arabidopsis thaliana | Tree-based ortholog | 1-to-many | AT2G38185 AT2G38220 AT2G38195 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G01450 | 1 | ||
Beta vulgaris | Tree-based ortholog | 1-to-many | BV5G09570 BV7G04960 | 2 | |
Anchor point | N/A | BV7G04960 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G09570 | 1 | ||
Brassica rapa | Tree-based ortholog | 1-to-many | BR05G07180 BR05G07170 BR05G07160 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G00290 | 1 | ||
Capsella rubella | Tree-based ortholog | 1-to-many | CRU_004G19560 CRU_004G19570 CRU_006G00360 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G00360 | 1 | ||
Carica papaya | Tree-based ortholog | 1-to-1 | CP00112G00240 | 1 | |
Anchor point | N/A | CP00011G01240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00011G01240 | 1 | ||
Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G06820 | 1 | |
Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00026G01130 | 1 | |
Anchor point | N/A | CS00026G01130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00026G01130 | 1 | ||
Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00057G00310 | 1 | |
Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0010G16480 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G25080 | 1 | ||
Fragaria vesca | Tree-based ortholog | 1-to-1 | FV6G10450 | 1 | |
Anchor point | N/A | FV6G10450 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G22480 | 1 | ||
Glycine max | Tree-based ortholog | 1-to-many | GM18G07020 GM18G43100 GM07G18240 | 3 | |
Anchor point | N/A | GM18G07020 GM18G43100 GM07G18240 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM18G43100 GM07G18240 | 2 | ||
Gossypium raimondii | Tree-based ortholog | 1-to-1 | GR09G09200 | 1 | |
Anchor point | N/A | GR02G26350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G09200 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ1G031610 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G031610 | 1 | ||
Malus domestica | Tree-based ortholog | 1-to-1 | MD11G005880 | 1 | |
Anchor point | N/A | MD11G005880 MD04G012410 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD04G012410 | 1 | ||
Manihot esculenta | Tree-based ortholog | 1-to-many | ME03150G00180 ME11928G00020 ME11928G00010 | 3 | |
Anchor point | N/A | ME03150G00180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03150G00180 | 1 | ||
Medicago truncatula | Tree-based ortholog | 1-to-many | MT3G463920 MT7G068580 | 2 | |
Anchor point | N/A | MT7G068580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G068580 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS05G44550 | 1 | |
Tree-based ortholog | 1-to-1 | OS05G44550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G44550 | 1 | ||
Physcomitrella patens | Orthologous gene family | 1-to-1 | PP00212G00300 | 1 | |
Tree-based ortholog | 1-to-many | PP00156G00380 PP00212G00300 PP00100G00290 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00100G00290 PP00156G00380 PP00212G00300 | 3 | ||
Populus trichocarpa | Orthologous gene family | 1-to-1 | PT01G25190 | 1 | |
Tree-based ortholog | 1-to-many | PT01G25190 PT16G11630 PT06G10040 | 3 | ||
Anchor point | N/A | PT06G10040 PT01G25190 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT06G10040 PT16G11630 | 2 | ||
Prunus persica | Tree-based ortholog | 1-to-1 | PPE_006G00200 | 1 | |
Anchor point | N/A | PPE_006G28430 PPE_006G00200 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G00200 | 1 | ||
Ricinus communis | Tree-based ortholog | 1-to-1 | RC29681G00540 | 1 | |
Anchor point | N/A | RC29701G00090 RC29681G00540 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29681G00540 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL09G005320 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G005320 | 1 | ||
Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST09G005350 | 1 | |
Anchor point | N/A | ST09G005350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G005350 | 1 | ||
Thellungiella parvula | Orthologous gene family | 1-to-1 | TP6G40740 | 1 | |
Tree-based ortholog | 1-to-many | TP4G20510 TP6G40740 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G40740 | 1 | ||
Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0009G29640 | 1 | |
Anchor point | N/A | TC0005G01600 TC0009G29640 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G29640 | 1 | ||
Vitis vinifera | Tree-based ortholog | 1-to-1 | VV06G01780 | 1 | |
Anchor point | N/A | VV06G01780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G01780 | 1 |