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Integrative Orthology Viewer:
ATR_00029G02440
(Amborella trichopoda)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | ATR_00029G02440 | 1 |  |
| Tree-based ortholog | ATR_00029G02440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | ATR_00029G02440 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL6G05430 | 1 | |
| Anchor point | N/A | AL4G24110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G05430 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | 1-to-1 | AT5G05830 | 1 | |
| Anchor point | N/A | AT2G37950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G05830 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV2G05120 | 1 | |
| Anchor point | N/A | BV2G05120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G05120 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-many | BR02G04190 BR10G24040 | 2 | |
| Anchor point | N/A | BR04G04960 BR05G07350 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR02G04190 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-1 | CRU_006G04620 | 1 | |
| Anchor point | N/A | CRU_004G19300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G04620 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00056G00620 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00056G00620 | 1 | ||
| Anchor point | N/A | CP00112G00900 CP00056G00620 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00056G00620 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G09640 | 1 | |
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL10G19610 | 1 | |
| Tree-based ortholog | 1-to-many | CL10G19610 CL04G07370 | 2 | ||
| Anchor point | N/A | CL04G07370 CL10G19610 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G19610 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00083G00400 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00083G00400 | 1 | ||
| Anchor point | N/A | CS00026G00530 CS00083G00400 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00083G00400 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00011G01260 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00011G01260 | 1 | ||
| Anchor point | N/A | CM00011G01260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00011G01260 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-many | EG0002G22430 EG0011G25370 | 2 | |
| Tree-based ortholog | 1-to-1 | EG0011G25370 | 1 | ||
| Anchor point | N/A | EG0011G25370 EG0002G22430 EG0010G02210 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G02210 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV6G11660 | 1 | |
| Tree-based ortholog | 1-to-1 | FV6G11660 | 1 | ||
| Anchor point | N/A | FV6G11660 FV7G28630 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G28630 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM07G17130 GM18G41833 | 2 | |
| Tree-based ortholog | 1-to-many | GM01G26670 GM03G15820 GM07G17130 ... | 4 | ||
| Anchor point | N/A | GM03G15820 GM01G26670 GM07G17130 ... | 6 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM07G17130 GM18G41833 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR06G17960 GR12G10940 | 2 | |
| Tree-based ortholog | 1-to-many | GR06G17960 GR12G10940 | 2 | ||
| Anchor point | N/A | GR11G27840 GR06G17960 GR12G10940 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR12G10940 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ1G044680 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ1G044680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G041650 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-1 | MD04G011420 | 1 | |
| Tree-based ortholog | 1-to-many | MD12G016470 MD04G011420 | 2 | ||
| Anchor point | N/A | MD04G011420 MD12G016470 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD14G016540 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME03651G00340 ME11828G00020 | 2 | |
| Tree-based ortholog | 1-to-many | ME03651G00340 ME11828G00020 | 2 | ||
| Anchor point | N/A | ME03651G00340 ME06512G02860 ME12439G00410 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME11828G00020 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT7G065920 | 1 | |
| Tree-based ortholog | 1-to-1 | MT7G065920 | 1 | ||
| Anchor point | N/A | MT7G065920 MT5G081560 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G065920 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS05G37900 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G37900 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00073G00020 PP00184G00180 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00184G00180 PP00073G00020 | 2 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT06G09400 PT16G10590 | 2 | |
| Tree-based ortholog | 1-to-many | PT16G10590 PT06G09400 | 2 | ||
| Anchor point | N/A | PT16G10590 PT06G09400 PT09G03970 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT16G10590 PT06G09400 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_006G27450 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_006G27450 | 1 | ||
| Anchor point | N/A | PPE_002G23470 PPE_006G01000 PPE_006G27450 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G27450 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC27798G00330 | 1 | |
| Tree-based ortholog | 1-to-1 | RC27798G00330 | 1 | ||
| Anchor point | N/A | RC27798G00330 RC29751G00300 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC27798G00330 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL09G011770 | 1 | |
| Tree-based ortholog | 1-to-many | SL09G011770 SL10G086700 | 2 | ||
| Anchor point | N/A | SL06G076610 SL09G011770 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G011770 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST09G012160 | 1 | |
| Tree-based ortholog | 1-to-many | ST09G012160 ST10G027810 | 2 | ||
| Anchor point | N/A | ST06G032400 ST09G012160 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G012160 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP6G37070 | 1 | |
| Anchor point | N/A | TP4G20260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G37070 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0005G02510 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0005G02510 | 1 | ||
| Anchor point | N/A | TC0010G02710 TC0005G02510 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G02510 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV08G13590 | 1 | |
| Tree-based ortholog | 1-to-1 | VV08G13590 | 1 | ||
| Anchor point | N/A | VV08G13590 VV13G04080 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G04080 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM08G01510 ZM08G17760 ZM06G25470 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G26850 | 1 |