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Integrative Orthology Viewer:
ATR_00025G03870
(Amborella trichopoda)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | ATR_00025G03870 | 1 |  |
| Tree-based ortholog | ATR_00025G03870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | ATR_00025G03870 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL5G34260 | 1 | |
| Tree-based ortholog | 1-to-many | AL5G34260 AL3G05170 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G32540 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT3G63120 | 1 | |
| Tree-based ortholog | 1-to-many | AT3G63120 AT3G05327 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G44740 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV4G04110 | 1 | |
| Tree-based ortholog | 1-to-1 | BV4G04110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G04110 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR09G41950 | 1 | |
| Tree-based ortholog | 1-to-1 | BR09G41950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G04530 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_005G28310 | 1 | |
| Tree-based ortholog | 1-to-many | CRU_005G28310 CRU_003G04420 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G26340 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00370G00080 | 1 | |
| Tree-based ortholog | 1-to-many | CP00370G00080 CP00048G00440 | 2 | ||
| Anchor point | N/A | CP00048G00440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00370G00080 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR02G11190 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR02G11190 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL09G06580 | 1 | |
| Tree-based ortholog | 1-to-many | CL09G06580 CL02G16080 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G06580 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00022G01390 | 1 | |
| Tree-based ortholog | 1-to-many | CS00022G01390 CS01432G00010 CS00103G00720 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00022G01390 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00026G01530 | 1 | |
| Tree-based ortholog | 1-to-many | CM00026G01530 CM00003G03930 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00026G01530 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0008G12740 | 1 | |
| Tree-based ortholog | 1-to-many | EG0008G12740 EG0002G15760 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G12740 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV2G25110 | 1 | |
| Tree-based ortholog | 1-to-many | FV2G25110 FV6G05820 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G25110 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM03G31030 GM19G33860 | 2 | |
| Tree-based ortholog | 1-to-many | GM03G31030 GM19G33860 GM19G42390 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM03G31030 GM19G33860 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR04G07980 GR07G13690 | 2 | |
| Tree-based ortholog | 1-to-many | GR04G07980 GR07G13690 GR04G24170 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G13690 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ1G036340 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G036340 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD03G022960 MD11G026000 | 2 | |
| Tree-based ortholog | 1-to-many | MD11G026000 MD03G022960 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD03G022960 MD11G026000 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME11998G00940 | 1 | |
| Tree-based ortholog | 1-to-many | ME11998G00940 ME03572G00110 | 2 | ||
| Anchor point | N/A | ME11998G00940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME11998G00940 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT7G094880 | 1 | |
| Tree-based ortholog | 1-to-1 | MT7G094880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G094880 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS05G33040 | 1 | |
| Tree-based ortholog | 1-to-1 | OS05G33040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G33040 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00008G01630 PP00387G00290 PP00044G00530 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00062G00520 PP00387G00290 PP00044G00530 ... | 5 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT02G05280 PT05G20980 | 2 | |
| Tree-based ortholog | 1-to-many | PT05G20980 PT02G05280 PT05G03360 ... | 4 | ||
| Anchor point | N/A | PT02G05280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT05G20980 PT02G05280 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_008G25470 | 1 | |
| Tree-based ortholog | 1-to-many | PPE_008G25470 PPE_006G33140 | 2 | ||
| Anchor point | N/A | PPE_008G25470 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G25470 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29647G00910 | 1 | |
| Tree-based ortholog | 1-to-many | RC29647G00910 RC30128G01620 | 2 | ||
| Anchor point | N/A | RC30128G01620 RC29647G00910 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29647G00910 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL09G065200 | 1 | |
| Tree-based ortholog | 1-to-many | SL09G065200 SL01G098930 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G065200 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-many | ST01G036690 ST09G019900 | 2 | |
| Tree-based ortholog | 1-to-many | ST09G019900 ST01G036690 | 2 | ||
| Anchor point | N/A | ST09G019900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G036690 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP5G00420 | 1 | |
| Tree-based ortholog | 1-to-many | TP5G00420 TP3G04190 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G00420 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0001G27790 | 1 | |
| Tree-based ortholog | 1-to-many | TC0001G27790 TC0005G30220 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G27790 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV07G04520 | 1 | |
| Tree-based ortholog | 1-to-many | VV07G04520 VV14G00360 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV16G01740 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM06G23780 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM06G23780 | 1 | ||
| Anchor point | N/A | ZM06G23780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G23780 | 1 |