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Integrative Orthology Viewer:
ATR_00024G01600
(Amborella trichopoda)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | ATR_00024G01600 ATR_00048G01350 | 2 |  |
| Tree-based ortholog | ATR_00024G01600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | ATR_00048G01350 ATR_00024G01600 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis lyrata | Tree-based ortholog | 1-to-many | AL2G04110 AL2G29020 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL7G23570 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | 1-to-1 | AT1G80740 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G19020 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV4G11840 | 1 | |
| Anchor point | N/A | BV5G18430 BV4G11840 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV4G11840 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-1 | BR06G07580 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR01G10150 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-1 | CRU_002G25360 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_007G21160 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00027G01710 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00027G01710 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR10G09540 CR03G14240 CR06G00160 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR10G09540 CR06G10470 | 2 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL10G01000 | 1 | |
| Tree-based ortholog | 1-to-1 | CL03G13680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL03G13680 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS01181G00010 | 1 | |
| Tree-based ortholog | 1-to-many | CS00588G00010 CS01181G00010 CS00639G00020 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00588G00010 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00025G04550 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00021G01130 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0004G21820 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0004G21820 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV0G28960 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV0G28960 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM01G36500 GM11G08861 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM11G08861 GM01G36500 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-1 | GR04G18030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR01G05200 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ4G043250 LJ2G028540 LJ2G028520 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ4G043250 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD00G080880 MD00G277860 | 2 | |
| Anchor point | N/A | MD13G010090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD13G010090 MD00G500600 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME03242G00030 ME06591G00140 | 2 | |
| Tree-based ortholog | 1-to-many | ME06591G00140 ME00560G00210 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME06591G00140 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT8G071100 | 1 | |
| Tree-based ortholog | 1-to-many | MT7G047650 MT5G074180 MT8G062550 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MT7G007090 MT4G017850 MT6G037900 ... | 5 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS10G01570 OS03G12570 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G12570 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00117G00270 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00117G00270 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-1 | PT03G10000 | 1 | |
| Tree-based ortholog | 1-to-many | PT03G21580 PT03G10000 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT01G00960 | 1 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_005G02680 | 1 | |
| Anchor point | N/A | PPE_006G06140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_006G06140 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC29827G01470 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC28582G00160 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL08G005400 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL12G100330 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST09G015740 ST09G015730 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST12G032890 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP1G10040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP7G17750 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0003G30910 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0003G30910 | 1 | ||
| Anchor point | N/A | TC0009G21120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0009G21120 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV16G06210 | 1 | |
| Tree-based ortholog | 1-to-many | VV16G06210 VV06G07020 | 2 | ||
| Anchor point | N/A | VV06G07020 VV08G08930 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV08G08930 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM10G23860 ZM02G04570 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM02G04570 ZM10G23860 | 2 |