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Integrative Orthology Viewer:
ATR_00024G00460
(Amborella trichopoda)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | ATR_00024G00460 | 1 |  |
| Tree-based ortholog | ATR_00024G00460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | ATR_00024G00460 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL5G01030 | 1 | |
| Tree-based ortholog | 1-to-many | AL1G15480 AL5G01030 AL2G16080 | 3 | ||
| Anchor point | N/A | AL2G16080 AL5G01030 AL1G15480 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G01030 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT2G01930 | 1 | |
| Tree-based ortholog | 1-to-many | AT1G14685 AT2G01930 AT1G68120 | 3 | ||
| Anchor point | N/A | AT1G14685 AT2G01930 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G01930 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV0G27570 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G27570 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR06G10200 BR09G48060 | 2 | |
| Tree-based ortholog | 1-to-many | BR09G48060 BR08G27340 BR02G18860 | 3 | ||
| Anchor point | N/A | BR09G48060 BR08G27340 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G48060 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-many | CRU_001G13820 CRU_005G00870 | 2 | |
| Tree-based ortholog | 1-to-many | CRU_001G13820 CRU_005G00870 CRU_002G13730 | 3 | ||
| Anchor point | N/A | CRU_001G13820 CRU_005G00870 CRU_002G13730 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G13730 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00002G01130 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00002G01130 | 1 | ||
| Anchor point | N/A | CP00002G01130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00002G01130 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL01G06600 | 1 | |
| Tree-based ortholog | 1-to-many | CL01G06600 CL01G06610 | 2 | ||
| Anchor point | N/A | CL01G06600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G06600 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS01024G00030 | 1 | |
| Tree-based ortholog | 1-to-1 | CS01024G00030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS01024G00030 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00005G01810 | 1 | |
| Tree-based ortholog | 1-to-many | CM00005G01810 CM00005G01800 | 2 | ||
| Anchor point | N/A | CM00005G01800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00005G01810 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0007G15560 | 1 | |
| Tree-based ortholog | 1-to-many | EG0007G15560 EG0008G04940 | 2 | ||
| Anchor point | N/A | EG0008G04940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G15560 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-many | FV2G17510 FV2G38950 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G24740 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM05G26790 GM08G09780 | 2 | |
| Tree-based ortholog | 1-to-many | GM05G26790 GM08G09780 GM07G12150 ... | 6 | ||
| Anchor point | N/A | GM08G09780 GM09G30040 GM05G26790 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM09G30050 GM07G12150 GM09G30040 ... | 4 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR02G17120 | 1 | |
| Tree-based ortholog | 1-to-many | GR12G18320 GR12G18310 GR02G17120 ... | 4 | ||
| Anchor point | N/A | GR02G17120 GR05G15420 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G17120 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ4G039590 | 1 | |
| Tree-based ortholog | 1-to-many | LJ4G039590 LJ2G009610 | 2 | ||
| Anchor point | N/A | LJ2G009610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G009610 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G323150 MD13G000910 | 2 | |
| Tree-based ortholog | 1-to-many | MD00G323150 MD13G000910 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD13G000910 MD00G323150 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME08799G00930 ME10173G00460 | 2 | |
| Tree-based ortholog | 1-to-many | ME08799G00930 ME10173G00460 | 2 | ||
| Anchor point | N/A | ME08799G00930 ME10173G00460 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME08799G00930 ME10173G00460 | 2 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-many | MT8G099780 MT1G023660 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G023660 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS10G02584 | 1 | |
| Tree-based ortholog | 1-to-many | OS10G02509 OS10G02584 OS10G02620 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS10G02584 OS10G02509 | 2 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00056G00020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00056G00020 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT08G14020 PT10G10140 | 2 | |
| Tree-based ortholog | 1-to-many | PT10G10140 PT08G14020 PT12G04030 ... | 11 | ||
| Anchor point | N/A | PT08G14020 PT15G03280 PT12G04030 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT08G14020 PT10G10140 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_001G34690 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_001G34690 | 1 | ||
| Anchor point | N/A | PPE_001G34690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G34690 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29780G00780 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29780G00780 | 1 | ||
| Anchor point | N/A | RC29780G00780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29780G00780 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL04G008380 | 1 | |
| Tree-based ortholog | 1-to-many | SL04G008380 SL06G072370 | 2 | ||
| Anchor point | N/A | SL04G008380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G008380 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST04G007040 | 1 | |
| Tree-based ortholog | 1-to-many | ST04G007040 ST06G028610 | 2 | ||
| Anchor point | N/A | ST04G007040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G007040 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-many | TP1G13070 TP2G13370 TP5G23120 | 3 | |
| Anchor point | N/A | TP5G23120 TP1G13070 TP2G13370 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G23120 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0002G30270 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0002G30270 | 1 | ||
| Anchor point | N/A | TC0002G30270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G30270 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV01G05300 | 1 | |
| Tree-based ortholog | 1-to-1 | VV01G05300 | 1 | ||
| Anchor point | N/A | VV01G05300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G05300 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-many | ZM01G33520 ZM02G26390 ZM04G09600 | 3 | |
| Tree-based ortholog | 1-to-many | ZM01G33520 ZM04G09600 ZM02G26390 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G26390 | 1 |