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Integrative Orthology Viewer:
ATR_00022G00310
(Amborella trichopoda)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | ATR_00022G00310 | 1 |  |
| Tree-based ortholog | ATR_00022G00310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | ATR_00022G00310 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis lyrata | Tree-based ortholog | 1-to-many | AL5G00110 AL1G15930 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G24990 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | 1-to-many | AT2G01150 AT1G15100 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G17905 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV0G43850 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G07200 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-many | BR08G02080 BR06G35780 BR09G22050 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G09130 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-many | CRU_005G00110 CRU_001G14220 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G22370 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00065G00790 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00180G00170 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-many | CL02G03120 CL07G01490 | 2 | |
| Tree-based ortholog | 1-to-1 | CL01G19300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CL02G03120 CL07G01490 | 2 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00023G02240 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00453G00030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00009G01240 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00066G00410 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00007G08150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CM00066G00410 CM00020G00240 | 2 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0007G18280 EG0007G18270 EG0007G18290 ... | 9 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0004G14190 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV3G06660 | 1 | |
| Tree-based ortholog | 1-to-1 | FV0G00710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | FV3G06660 FV2G12780 | 2 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM10G43518 GM20G23271 | 2 | |
| Tree-based ortholog | 1-to-many | GM05G31570 GM08G14801 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM20G23271 GM10G43518 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR05G21530 | 1 | |
| Tree-based ortholog | 1-to-1 | GR03G04580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR05G21530 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ4G037210 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G046130 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G090050 MD09G008980 | 2 | |
| Tree-based ortholog | 1-to-many | MD08G004060 MD00G285140 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G090050 MD09G008980 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME06582G00800 | 1 | |
| Tree-based ortholog | 1-to-many | ME08265G00380 ME07706G00010 ME00874G00020 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08159G00060 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT1G115270 | 1 | |
| Tree-based ortholog | 1-to-many | MT8G091560 MT3G087900 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G115270 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS07G48680 OS08G06090 OS04G49160 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G57460 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00148G00420 PP00078G00440 | 2 | |
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT04G20960 PT09G17050 | 2 | |
| Tree-based ortholog | 1-to-many | PT07G08630 PT05G08130 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT09G17050 PT04G20960 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_008G20020 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_001G32860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G20020 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30162G00210 | 1 | |
| Tree-based ortholog | 1-to-1 | RC28016G00050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30174G03170 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL04G054370 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL08G081370 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST01G037900 | 1 | |
| Tree-based ortholog | 1-to-1 | ST04G022330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G037910 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP7G37610 | 1 | |
| Tree-based ortholog | 1-to-1 | TP2G12620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G16200 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0002G14360 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0001G10510 | 1 | ||
| Anchor point | N/A | TC0002G14360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G14360 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-many | VV01G08760 VV01G08720 VV01G08730 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G03330 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM04G07520 ZM02G06490 ZM10G21430 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM09G21420 ZM03G11020 | 2 |