Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
ATR_00022G00160
(Amborella trichopoda)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | ATR_00022G00160 | 1 |  |
| Tree-based ortholog | ATR_00068G00110 ATR_00022G00160 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | ATR_00022G00160 ATR_00068G00110 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis lyrata | Tree-based ortholog | many-to-1 | AL3G24630 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL3G24630 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | many-to-1 | AT3G22320 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G22320 | 1 | ||
| Beta vulgaris | Tree-based ortholog | many-to-many | BV2G16540 BV3G12620 BV1G03770 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV1G03770 | 1 | ||
| Brassica rapa | Tree-based ortholog | many-to-many | BR05G21600 BR03G37090 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR03G37090 | 1 | ||
| Capsella rubella | Tree-based ortholog | many-to-1 | CRU_003G21510 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_003G21510 | 1 | ||
| Carica papaya | Tree-based ortholog | many-to-1 | CP00012G00330 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00012G00330 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | many-to-1 | CR09G09130 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR09G09130 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | many-to-many | CL09G07430 CL00G00470 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL09G07430 | 1 | ||
| Citrus sinensis | Tree-based ortholog | many-to-1 | CS00027G00110 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00027G00110 | 1 | ||
| Cucumis melo | Tree-based ortholog | many-to-many | CM00026G00300 CM00039G01240 CM00049G00980 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00026G00300 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | many-to-1 | EG0003G10480 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0003G10480 | 1 | ||
| Fragaria vesca | Tree-based ortholog | many-to-many | FV5G30290 FV7G20470 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV5G30290 | 1 | ||
| Glycine max | Tree-based ortholog | many-to-many | GM07G09230 GM09G32550 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM07G09230 GM09G32550 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | many-to-many | GR04G28090 GR01G00720 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR04G28090 | 1 | ||
| Lotus japonicus | Tree-based ortholog | many-to-many | LJ2G012100 LJ4G050250 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ2G012100 | 1 | ||
| Malus domestica | Tree-based ortholog | many-to-many | MD00G313050 MD00G377980 MD00G391260 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD00G377980 MD00G391260 MD00G391190 ... | 4 | ||
| Manihot esculenta | Tree-based ortholog | many-to-1 | ME00847G00780 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME00847G00780 | 1 | ||
| Medicago truncatula | Tree-based ortholog | many-to-many | MT5G005470 MT5G016220 MT5G016200 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT5G005470 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | many-to-many | OS04G41040 OS01G59140 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G59140 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | many-to-1 | OL04G04770 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL04G04770 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | many-to-many | PP00032G01340 PP00129G00120 PP00014G01350 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00032G01340 PP00014G01350 | 2 | ||
| Populus trichocarpa | Tree-based ortholog | many-to-1 | PT06G16160 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT06G16160 | 1 | ||
| Prunus persica | Tree-based ortholog | many-to-many | PPE_002G12540 PPE_002G12550 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_002G12550 | 1 | ||
| Ricinus communis | Tree-based ortholog | many-to-1 | RC29912G02060 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29912G02060 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | many-to-1 | SL05G051790 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL05G051790 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | many-to-many | ST05G024410 ST03G014060 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST05G024410 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | many-to-1 | TP3G20110 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP3G20110 | 1 | ||
| Theobroma cacao | Tree-based ortholog | many-to-1 | TC0009G10100 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0009G10100 | 1 | ||
| Vitis vinifera | Tree-based ortholog | many-to-1 | VV11G04820 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV11G04820 | 1 | ||
| Zea mays | Tree-based ortholog | many-to-many | ZM02G11850 ZM08G19890 ZM04G19060 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM08G33300 | 1 |