Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
ATR_00020G01080
(Amborella trichopoda)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | ATR_00020G01080 | 1 |  |
| Tree-based ortholog | ATR_00020G01080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | ATR_00020G01080 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL6G36080 | 1 | |
| Tree-based ortholog | 1-to-many | AL2G03130 AL7G20000 AL6G36080 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G36080 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT4G03965 | 1 | |
| Tree-based ortholog | 1-to-many | AT1G62370 AT4G22250 AT4G03965 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G03965 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV8G12450 | 1 | |
| Tree-based ortholog | 1-to-1 | BV8G12450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV8G12450 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR03G26310 | 1 | |
| Tree-based ortholog | 1-to-many | BR00G05110 BR01G12480 BR03G46270 ... | 4 | ||
| Anchor point | N/A | BR05G34130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G26310 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_006G30840 | 1 | |
| Tree-based ortholog | 1-to-many | CRU_002G02520 CRU_007G18150 CRU_006G30840 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G30840 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP45104G00010 | 1 | |
| Tree-based ortholog | 1-to-many | CP00132G00300 CP45104G00010 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP45104G00010 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL01G21720 | 1 | |
| Tree-based ortholog | 1-to-many | CL09G10670 CL01G21720 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G21720 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00007G03350 | 1 | |
| Tree-based ortholog | 1-to-many | CS00126G00260 CS00007G03350 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00007G03350 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00007G04490 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00007G04490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00007G04490 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0005G29970 | 1 | |
| Tree-based ortholog | 1-to-many | EG0011G06300 EG0005G29970 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0005G29970 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV3G01790 | 1 | |
| Tree-based ortholog | 1-to-1 | FV3G01790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G01790 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM07G39410 GM09G01090 GM15G11920 ... | 4 | |
| Tree-based ortholog | 1-to-many | GM15G11920 GM09G01090 GM07G39410 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM17G01340 GM07G39410 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR09G18240 | 1 | |
| Tree-based ortholog | 1-to-many | GR07G17020 GR10G18480 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR01G23340 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-many | LJ4G001580 LJ6G021800 | 2 | |
| Tree-based ortholog | 1-to-many | LJ6G021800 LJ4G001580 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G021800 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G212400 MD00G340250 MD05G001030 | 3 | |
| Tree-based ortholog | 1-to-many | MD00G340250 MD00G212400 MD05G001030 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G212400 MD00G340250 MD05G001030 | 3 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME00372G00010 | 1 | |
| Tree-based ortholog | 1-to-many | ME04134G00040 ME05214G00410 ME00372G00010 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME00372G00010 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT4G132760 | 1 | |
| Tree-based ortholog | 1-to-many | MT2G025080 MT4G132760 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G132760 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS01G68900 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G68900 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00097G00280 PP00039G00630 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00097G00280 PP00039G00630 | 2 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT04G00310 | 1 | |
| Tree-based ortholog | 1-to-1 | PT14G15890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT04G00310 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_004G01290 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_004G01290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G01290 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29842G00220 | 1 | |
| Tree-based ortholog | 1-to-many | RC29948G00320 RC29842G00220 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29842G00220 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL02G081180 | 1 | |
| Tree-based ortholog | 1-to-many | SL02G081180 SL03G031830 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G081180 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST02G024290 | 1 | |
| Tree-based ortholog | 1-to-many | ST02G024290 ST03G008340 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G008340 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP6G04740 | 1 | |
| Tree-based ortholog | 1-to-many | TP2G02230 TP7G20370 TP6G04740 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G04740 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0006G22210 | 1 | |
| Tree-based ortholog | 1-to-many | TC0001G17730 TC0006G22210 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0006G22210 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV12G11430 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV00G05580 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM03G23050 ZM08G29190 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM03G23050 ZM08G29190 | 2 |