Integrative Orthology Viewer: ATR_00019G04440 (Amborella trichopoda)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | ATR_00019G04440 ATR_00019G04460 ATR_00019G04490 ... | 4 | |
Tree-based ortholog | ATR_00019G04440 ATR_00019G04460 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | ATR_00019G04440 ATR_00103G00380 ATR_00019G04460 | 3 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G51740 AL3G04960 AL4G36240 ... | 5 | |
Tree-based ortholog | many-to-1 | AL6G18990 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL6G18990 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G08930 AT1G54730 AT2G48020 ... | 7 | |
Tree-based ortholog | many-to-1 | AT5G18840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G18840 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV0G18360 BV0G73070 BV0G73080 ... | 5 | |
Tree-based ortholog | many-to-1 | BV0G73160 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV0G73070 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G40610 BR07G01350 BR07G10950 ... | 4 | |
Tree-based ortholog | many-to-1 | BR10G15920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR10G15920 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_002G08220 CRU_003G04230 CRU_006G16730 | 3 | |
Tree-based ortholog | many-to-1 | CRU_006G16730 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_002G08220 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00009G01320 CP00048G00020 CP00084G01220 ... | 4 | |
Tree-based ortholog | many-to-1 | CP00447G00020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00447G00020 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR03G12890 | 1 | |
Citrullus lanatus | Orthologous gene family | many-to-many | CL03G16330 CL06G05370 CL07G02860 | 3 | |
Tree-based ortholog | many-to-many | CL06G05370 CL05G06370 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL06G05370 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00001G08720 CS00011G02280 CS00407G00170 | 3 | |
Tree-based ortholog | many-to-many | CS00011G02280 CS00269G00020 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00407G00170 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00022G02390 CM00025G01330 | 2 | |
Tree-based ortholog | many-to-1 | CM00047G02540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00025G01330 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G15950 EG0002G15960 EG0002G15970 ... | 27 | |
Tree-based ortholog | many-to-1 | EG0008G29660 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0008G29660 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV2G25970 FV2G26000 FV2G26010 ... | 11 | |
Tree-based ortholog | many-to-1 | FV4G11460 | 1 | ||
Anchor point | N/A | FV6G06680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV4G11460 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM03G30550 GM03G40100 GM03G40160 ... | 12 | |
Tree-based ortholog | many-to-many | GM17G02461 GM07G38275 GM15G10630 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM13G28450 GM13G28440 GM15G10630 | 3 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR04G05460 GR04G08430 GR05G05640 ... | 8 | |
Tree-based ortholog | many-to-many | GR11G18350 GR05G05640 GR04G05460 | 3 | ||
Anchor point | N/A | GR07G29220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR05G05640 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G072710 LJ4G038670 LJ6G023980 | 3 | |
Tree-based ortholog | many-to-many | LJ4G038670 LJ6G023980 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ6G023980 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G221710 MD11G027080 MD11G027090 ... | 4 | |
Tree-based ortholog | many-to-1 | MD16G013030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD11G027110 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME01551G02980 ME03614G04260 ME03614G04270 ... | 8 | |
Tree-based ortholog | many-to-1 | ME01551G02980 | 1 | ||
Anchor point | N/A | ME04285G00080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME03614G04270 ME04285G00080 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT2G020710 MT4G118610 MT7G094110 ... | 6 | |
Tree-based ortholog | many-to-many | MT4G118610 MT2G020710 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT4G118610 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G24860 OS03G24870 OS11G42430 | 3 | |
Tree-based ortholog | many-to-1 | OS11G42430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS11G42430 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL20G01710 | 1 | |
Physcomitrella patens | Tree-based ortholog | many-to-many | PP00101G00090 PP00334G00220 PP00438G00080 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00101G00090 PP00334G00220 PP00438G00080 | 3 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT02G21290 PT05G03700 PT05G03990 ... | 8 | |
Tree-based ortholog | many-to-1 | PT10G02650 | 1 | ||
Anchor point | N/A | PT13G02750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT13G02750 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G13720 PPE_001G13730 PPE_006G33590 ... | 5 | |
Tree-based ortholog | many-to-1 | PPE_001G13720 | 1 | ||
Anchor point | N/A | PPE_006G33590 PPE_008G26150 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_001G13720 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29726G00700 RC30128G01080 RC30128G01090 ... | 6 | |
Tree-based ortholog | many-to-1 | RC29726G00700 | 1 | ||
Anchor point | N/A | RC30128G01080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30128G01110 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G080680 SL01G098560 SL09G074230 | 3 | |
Tree-based ortholog | many-to-1 | SL01G080680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL09G074230 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G022400 ST01G036250 ST01G038980 ... | 5 | |
Tree-based ortholog | many-to-many | ST01G022400 ST01G038980 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST09G021710 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP3G03970 TP3G32710 TP6G25530 | 3 | |
Tree-based ortholog | many-to-1 | TP6G25530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP6G25530 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G28530 TC0001G28650 TC0004G27610 ... | 6 | |
Tree-based ortholog | many-to-many | TC0004G27610 TC0001G28650 | 2 | ||
Anchor point | N/A | TC0005G29650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0001G28650 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV05G03730 VV05G03800 VV05G03810 ... | 14 | |
Tree-based ortholog | many-to-many | VV05G03730 VV05G03810 VV05G03800 | 3 | ||
Anchor point | N/A | VV07G04260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV05G03730 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G16180 ZM01G16190 ZM03G08020 | 3 | |
Tree-based ortholog | many-to-1 | ZM03G08020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G16190 | 1 |